User profiles for Christian J. Stoeckert
Christian StoeckertReseach Professor of Genetics, University of Pennsylvania Verified email at upenn.edu Cited by 32294 |
OrthoMCL: identification of ortholog groups for eukaryotic genomes
L Li, CJ Stoeckert, DS Roos - Genome research, 2003 - genome.cshlp.org
The identification of orthologous groups is useful for genome annotation, studies on gene/protein
evolution, comparative genomics, and the identification of taxonomically restricted …
evolution, comparative genomics, and the identification of taxonomically restricted …
PlasmoDB: a functional genomic database for malaria parasites
…, DS Roos, C Ross, CJ Stoeckert Jr… - Nucleic acids …, 2009 - academic.oup.com
PlasmoDB ( http://PlasmoDB.org ) is a functional genomic database for Plasmodium spp.
that provides a resource for data analysis and visualization in a gene-by-gene or genome-wide …
that provides a resource for data analysis and visualization in a gene-by-gene or genome-wide …
TriTrypDB: a functional genomic resource for the Trypanosomatidae
…, G Srinivasamoorthy, CJ Stoeckert Jr… - Nucleic acids …, 2010 - academic.oup.com
TriTrypDB ( http://tritrypdb.org ) is an integrated database providing access to genome-scale
datasets for kinetoplastid parasites, and supporting a variety of complex queries driven by …
datasets for kinetoplastid parasites, and supporting a variety of complex queries driven by …
[HTML][HTML] Comparative genomics of the neglected human malaria parasite Plasmodium vivax
The human malaria parasite Plasmodium vivax is responsible for 25–40% of the ∼515 million
annual cases of malaria worldwide. Although seldom fatal, the parasite elicits severe and …
annual cases of malaria worldwide. Although seldom fatal, the parasite elicits severe and …
OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups
F Chen, AJ Mackey, CJ Stoeckert Jr… - Nucleic acids …, 2006 - academic.oup.com
The OrthoMCL database ( http://orthomcl.cbil.upenn.edu ) houses ortholog group
predictions for 55 species, including 16 bacterial and 4 archaeal genomes representing …
predictions for 55 species, including 16 bacterial and 4 archaeal genomes representing …
PPARγ and C/EBP factors orchestrate adipocyte biology via adjacent binding on a genome-wide scale
…, D Feng, D Zhuo, CJ Stoeckert… - Genes & …, 2008 - genesdev.cshlp.org
Peroxisome proliferator-activated receptor γ(PPARγ), a nuclear receptor and the target of
anti-diabetic thiazolinedione drugs, is known as the master regulator of adipocyte biology. …
anti-diabetic thiazolinedione drugs, is known as the master regulator of adipocyte biology. …
VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center
…, D Spruill, D Starns, CJ Stoeckert Jr… - Nucleic Acids …, 2022 - academic.oup.com
The Eukaryotic Pathogen, Vector and Host Informatics Resource (VEuPathDB, https://veupathdb.org
) represents the 2019 merger of VectorBase with the EuPathDB projects. As a …
) represents the 2019 merger of VectorBase with the EuPathDB projects. As a …
Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project
…, D Schober, B Smith, J Snape, CJ Stoeckert Jr… - Nature …, 2008 - nature.com
The Minimum Information for Biological and Biomedical Investigations (MIBBI) project aims
to foster the coordinated development of minimum-information checklists and provide a …
to foster the coordinated development of minimum-information checklists and provide a …
ToxoDB: an integrated Toxoplasma gondii database resource
…, DF Pinney, DS Roos, CJ Stoeckert… - Nucleic acids …, 2007 - academic.oup.com
ToxoDB ( http://ToxoDB.org ) is a genome and functional genomic database for the protozoan
parasite Toxoplasma gondii . It incorporates the sequence and annotation of the T. gondii …
parasite Toxoplasma gondii . It incorporates the sequence and annotation of the T. gondii …
[HTML][HTML] Promoter features related to tissue specificity as measured by Shannon entropy
…, C Kappen, JM Salbaum, M Bucan, CJ Stoeckert - Genome biology, 2005 - Springer
Background The regulatory mechanisms underlying tissue specificity are a crucial part of
the development and maintenance of multicellular organisms. A genome-wide analysis of …
the development and maintenance of multicellular organisms. A genome-wide analysis of …