User profiles for Christian K. Frese

Christian K. Frese

Bayer
Verified email at bayer.com
Cited by 3514

[PDF][PDF] Comprehensive identification of RNA-binding domains in human cells

A Castello, B Fischer, CK Frese, R Horos, AM Alleaume… - Molecular cell, 2016 - cell.com
Mammalian cells harbor more than a thousand RNA-binding proteins (RBPs), with half of
these employing unknown modes of RNA binding. We developed RBDmap to determine the …

Improved peptide identification by targeted fragmentation using CID, HCD and ETD on an LTQ-Orbitrap Velos

CK Frese, AFM Altelaar, ML Hennrich… - Journal of proteome …, 2011 - ACS Publications
Over the past decade peptide sequencing by collision induced dissociation (CID) has
become the method of choice in mass spectrometry-based proteomics. The development of …

Toward full peptide sequence coverage by dual fragmentation combining electron-transfer and higher-energy collision dissociation tandem mass spectrometry

CK Frese, AFM Altelaar, H van den Toorn… - Analytical …, 2012 - ACS Publications
Increasing peptide sequence coverage by tandem mass spectrometry improves confidence
in database search-based peptide identification and facilitates mapping of post-translational …

Unambiguous phosphosite localization using electron-transfer/higher-energy collision dissociation (EThcD)

CK Frese, H Zhou, T Taus, AFM Altelaar… - Journal of proteome …, 2013 - ACS Publications
We recently introduced a novel scheme combining electron-transfer and higher-energy
collision dissociation (termed EThcD), for improved peptide ion fragmentation and identification. …

Expanding the detectable HLA peptide repertoire using electron-transfer/higher-energy collision dissociation (EThcD)

GPM Mommen, CK Frese, HD Meiring… - Proceedings of the …, 2014 - National Acad Sciences
The identification of peptides presented by human leukocyte antigen (HLA) class I is tremendously
important for the understanding of antigen presentation mechanisms under healthy or …

De novo discovery of phenotypic intratumour heterogeneity using imaging mass spectrometry

B Balluff, CK Frese, SK Maier, C Schöne… - The Journal of …, 2015 - Wiley Online Library
An essential and so far unresolved factor influencing the evolution of cancer and the clinical
management of patients is intratumour clonal and phenotypic heterogeneity. However, the …

[HTML][HTML] Global changes of the RNA-bound proteome during the maternal-to-zygotic transition in Drosophila

VO Sysoev, B Fischer, CK Frese, I Gupta… - Nature …, 2016 - nature.com
The maternal-to-zygotic transition (MZT) is a process that occurs in animal embryos at the
earliest developmental stages, during which maternally deposited mRNAs and other …

[HTML][HTML] A salvage pathway maintains highly functional respiratory complex I

…, A Rumyantseva, S Müller, CK Frese… - Nature …, 2020 - nature.com
Regulation of the turnover of complex I (CI), the largest mitochondrial respiratory chain
complex, remains enigmatic despite huge advancement in understanding its structure and the …

Benchmarking stable isotope labeling based quantitative proteomics

AFM Altelaar, CK Frese, C Preisinger, ML Hennrich… - Journal of …, 2013 - Elsevier
Several quantitative mass spectrometry based technologies have recently evolved to interrogate
the complexity, interconnectivity and dynamic nature of proteomes. Currently, the most …

[PDF][PDF] Mitochondria-endoplasmic reticulum contacts in reactive astrocytes promote vascular remodeling

…, K Folz-Donahue, C Kukat, A Schauss, CK Frese… - Cell Metabolism, 2020 - cell.com
Astrocytes have emerged for playing important roles in brain tissue repair; however, the
underlying mechanisms remain poorly understood. We show that acute injury and blood-brain …