User profiles for Claudia Arnedo-Pac

Claudia Arnedo-Pac

Postdoctoral researcher, Aitken Lab, MRC Toxicology Unit, Cambridge University
Verified email at cam.ac.uk
Cited by 945

A compendium of mutational cancer driver genes

…, J Deu-Pons, I Reyes-Salazar, C Arnedo-Pac… - Nature Reviews …, 2020 - nature.com
A fundamental goal in cancer research is to understand the mechanisms of cell transformation.
This is key to developing more efficient cancer detection methods and therapeutic …

[PDF][PDF] Germline MBD4 deficiency causes a multi-tumor predisposition syndrome

…, T van Wezel, C Whalley, C Arnedo-Pac… - The American Journal of …, 2022 - cell.com
We report an autosomal recessive, multi-organ tumor predisposition syndrome, caused by bi-allelic
loss-of-function germline variants in the base excision repair (BER) gene MBD4. We …

OncodriveCLUSTL: a sequence-based clustering method to identify cancer drivers

C Arnedo-Pac, L Mularoni, F Muiños… - …, 2019 - academic.oup.com
Motivation Identification of the genomic alterations driving tumorigenesis is one of the main
goals in oncogenomics research. Given the evolutionary principles of cancer development, …

Pervasive lesion segregation shapes cancer genome evolution

…, S Aitken, J Luft, E Kentepozidou, C Arnedo-Pac… - Nature, 2020 - nature.com
Cancers arise through the acquisition of oncogenic mutations and grow by clonal expansion
1 , 2 . Here we reveal that most mutagenic DNA lesions are not resolved into a mutated …

[HTML][HTML] Combined presentation and immunogenicity analysis reveals a recurrent RAS. Q61K neoantigen in melanoma

…, C Barbolin, R Levy, C Arnedo-Pac… - The Journal of …, 2021 - Am Soc Clin Investig
Neoantigens are now recognized drivers of the antitumor immune response. Recurrent
neoantigens, shared among groups of patients, have thus become increasingly coveted …

PI3K–Akt signaling controls PFKFB3 expression during human T-lymphocyte activation

H Simon-Molas, C Arnedo-Pac, P Fontova… - Molecular and Cellular …, 2018 - Springer
Lymphocyte activation is associated with rapid increase of both the glycolytic activator
fructose 2,6-bisphosphate (Fru-2,6-P 2 ) and the enzyme responsible for its synthesis, 6-…

Hotspot propensity across mutational processes

C Arnedo-Pac, F Muiños, A Gonzalez-Perez… - Molecular Systems …, 2024 - embopress.org
The sparsity of mutations observed across tumours hinders our ability to study mutation rate
variability at nucleotide resolution. To circumvent this, here we investigated the propensity of …

Whole genome sequencing of 2,023 colorectal cancers reveals mutational landscapes, new driver genes and immune interactions

…, B Noyvert, E Lakatos, HM Wood, C Arnedo-Pac… - bioRxiv, 2022 - biorxiv.org
To characterise the somatic alterations in colorectal cancer (CRC), we conducted whole-genome
sequencing analysis of 2,023 tumours. We provide the most detailed high-resolution …

Predicting disease variants using biodiversity and machine learning

C Arnedo-Pac, N Lopez-Bigas, F Muiños - Nature Biotechnology, 2022 - nature.com
An algorithm that uses evolutionary data to predict disease variants makes a case for
embracing computational evidence for clinical interpretation of genetic variation.

[HTML][HTML] TP53-induced glycolysis and apoptosis regulator (TIGAR) is upregulated in lymphocytes stimulated with concanavalin A

…, I Caldera-Quevedo, P Fontova, C Arnedo-Pac… - International Journal of …, 2021 - mdpi.com
The glycolytic modulator TP53-Inducible Glycolysis and Apoptosis Regulator (TIGAR) is
overexpressed in several types of cancer and has a role in metabolic rewiring during tumor …