User profiles for Claudia Arnedo-Pac
Claudia Arnedo-PacPostdoctoral researcher, Aitken Lab, MRC Toxicology Unit, Cambridge University Verified email at cam.ac.uk Cited by 945 |
A compendium of mutational cancer driver genes
…, J Deu-Pons, I Reyes-Salazar, C Arnedo-Pac… - Nature Reviews …, 2020 - nature.com
A fundamental goal in cancer research is to understand the mechanisms of cell transformation.
This is key to developing more efficient cancer detection methods and therapeutic …
This is key to developing more efficient cancer detection methods and therapeutic …
[PDF][PDF] Germline MBD4 deficiency causes a multi-tumor predisposition syndrome
…, T van Wezel, C Whalley, C Arnedo-Pac… - The American Journal of …, 2022 - cell.com
We report an autosomal recessive, multi-organ tumor predisposition syndrome, caused by bi-allelic
loss-of-function germline variants in the base excision repair (BER) gene MBD4. We …
loss-of-function germline variants in the base excision repair (BER) gene MBD4. We …
OncodriveCLUSTL: a sequence-based clustering method to identify cancer drivers
C Arnedo-Pac, L Mularoni, F Muiños… - …, 2019 - academic.oup.com
Motivation Identification of the genomic alterations driving tumorigenesis is one of the main
goals in oncogenomics research. Given the evolutionary principles of cancer development, …
goals in oncogenomics research. Given the evolutionary principles of cancer development, …
Pervasive lesion segregation shapes cancer genome evolution
…, S Aitken, J Luft, E Kentepozidou, C Arnedo-Pac… - Nature, 2020 - nature.com
Cancers arise through the acquisition of oncogenic mutations and grow by clonal expansion
1 , 2 . Here we reveal that most mutagenic DNA lesions are not resolved into a mutated …
1 , 2 . Here we reveal that most mutagenic DNA lesions are not resolved into a mutated …
[HTML][HTML] Combined presentation and immunogenicity analysis reveals a recurrent RAS. Q61K neoantigen in melanoma
…, C Barbolin, R Levy, C Arnedo-Pac… - The Journal of …, 2021 - Am Soc Clin Investig
Neoantigens are now recognized drivers of the antitumor immune response. Recurrent
neoantigens, shared among groups of patients, have thus become increasingly coveted …
neoantigens, shared among groups of patients, have thus become increasingly coveted …
PI3K–Akt signaling controls PFKFB3 expression during human T-lymphocyte activation
H Simon-Molas, C Arnedo-Pac, P Fontova… - Molecular and Cellular …, 2018 - Springer
Lymphocyte activation is associated with rapid increase of both the glycolytic activator
fructose 2,6-bisphosphate (Fru-2,6-P 2 ) and the enzyme responsible for its synthesis, 6-…
fructose 2,6-bisphosphate (Fru-2,6-P 2 ) and the enzyme responsible for its synthesis, 6-…
Hotspot propensity across mutational processes
The sparsity of mutations observed across tumours hinders our ability to study mutation rate
variability at nucleotide resolution. To circumvent this, here we investigated the propensity of …
variability at nucleotide resolution. To circumvent this, here we investigated the propensity of …
Whole genome sequencing of 2,023 colorectal cancers reveals mutational landscapes, new driver genes and immune interactions
To characterise the somatic alterations in colorectal cancer (CRC), we conducted whole-genome
sequencing analysis of 2,023 tumours. We provide the most detailed high-resolution …
sequencing analysis of 2,023 tumours. We provide the most detailed high-resolution …
Predicting disease variants using biodiversity and machine learning
An algorithm that uses evolutionary data to predict disease variants makes a case for
embracing computational evidence for clinical interpretation of genetic variation.
embracing computational evidence for clinical interpretation of genetic variation.
[HTML][HTML] TP53-induced glycolysis and apoptosis regulator (TIGAR) is upregulated in lymphocytes stimulated with concanavalin A
…, I Caldera-Quevedo, P Fontova, C Arnedo-Pac… - International Journal of …, 2021 - mdpi.com
The glycolytic modulator TP53-Inducible Glycolysis and Apoptosis Regulator (TIGAR) is
overexpressed in several types of cancer and has a role in metabolic rewiring during tumor …
overexpressed in several types of cancer and has a role in metabolic rewiring during tumor …