User profiles for Claudia Calabrese
Claudia CalabreseIllumina ltd Verified email at illumina.com Cited by 3263 |
[HTML][HTML] Genomic basis for RNA alterations in cancer
PCAWG Transcriptome Core Group Calabrese Claudia … - Nature, 2020 - nature.com
Transcript alterations often result from somatic changes in cancer genomes 1 . Various forms
of RNA alterations have been described in cancer, including overexpression 2 , altered …
of RNA alterations have been described in cancer, including overexpression 2 , altered …
MToolBox: a highly automated pipeline for heteroplasmy annotation and prioritization analysis of human mitochondrial variants in high-throughput sequencing
Motivation: The increasing availability of mitochondria-targeted and off-target sequencing
data in whole-exome and whole-genome sequencing studies (WXS and WGS) has risen the …
data in whole-exome and whole-genome sequencing studies (WXS and WGS) has risen the …
An atlas of mitochondrial DNA genotype–phenotype associations in the UK Biobank
Mitochondrial DNA (mtDNA) variation in common diseases has been underexplored, partly
due to a lack of genotype calling and quality-control procedures. Developing an at-scale …
due to a lack of genotype calling and quality-control procedures. Developing an at-scale …
[PDF][PDF] A pan-cancer transcriptome analysis reveals pervasive regulation through alternative promoters
Most human protein-coding genes are regulated by multiple, distinct promoters, suggesting
that the choice of promoter is as important as its level of transcriptional activity. However, …
that the choice of promoter is as important as its level of transcriptional activity. However, …
HmtDB, a genomic resource for mitochondrion-based human variability studies
HmtDB ( http://www.hmtdb.uniba.it:8080/hmdb ) is a open resource created to support population
genetics and mitochondrial disease studies. The database hosts human mitochondrial …
genetics and mitochondrial disease studies. The database hosts human mitochondrial …
[HTML][HTML] Respiratory complex I is essential to induce a Warburg profile in mitochondria-defective tumor cells
C Calabrese, L Iommarini, I Kurelac, MA Calvaruso… - Cancer & …, 2013 - Springer
Background Aerobic glycolysis, namely the Warburg effect, is the main hallmark of cancer
cells. Mitochondrial respiratory dysfunction has been proposed to be one of the major causes …
cells. Mitochondrial respiratory dysfunction has been proposed to be one of the major causes …
Mitochondrial DNA variants modulate N-formylmethionine, proteostasis and risk of late-onset human diseases
…, K Kundu, AI Burgess, ZJ Golder, C Calabrese… - Nature medicine, 2021 - nature.com
Mitochondrial DNA (mtDNA) variants influence the risk of late-onset human diseases, but
the reasons for this are poorly understood. Undertaking a hypothesis-free analysis of 5,689 …
the reasons for this are poorly understood. Undertaking a hypothesis-free analysis of 5,689 …
Mitochondrial Disease Sequence Data Resource (MSeqDR): a global grass-roots consortium to facilitate deposition, curation, annotation, and integrated analysis of …
…, D Behar, P Bonnen, L Brooks, C Calabrese… - Molecular genetics and …, 2015 - Elsevier
Success rates for genomic analyses of highly heterogeneous disorders can be greatly
improved if a large cohort of patient data is assembled to enhance collective capabilities for …
improved if a large cohort of patient data is assembled to enhance collective capabilities for …
Use of whole genome sequencing to determine genetic basis of suspected mitochondrial disorders: cohort study
Objective To determine whether whole genome sequencing can be used to define the molecular
basis of suspected mitochondrial disease. Design Cohort study. Setting National Health …
basis of suspected mitochondrial disease. Design Cohort study. Setting National Health …
HmtDB 2016: data update, a better performing query system and human mitochondrial DNA haplogroup predictor
R Clima, R Preste, C Calabrese… - Nucleic acids …, 2017 - academic.oup.com
The HmtDB resource hosts a database of human mitochondrial genome sequences from
individuals with healthy and disease phenotypes. The database is intended to support both …
individuals with healthy and disease phenotypes. The database is intended to support both …