User profiles for Corey Nolet

Corey J Nolet

Nvidia; PhD candidate, University of Maryland, Baltimore County, Dept. of CS & EE
Verified email at umbc.edu
Cited by 643

[HTML][HTML] Machine learning in python: Main developments and technology trends in data science, machine learning, and artificial intelligence

S Raschka, J Patterson, C Nolet - Information, 2020 - mdpi.com
Smarter applications are making better use of the insights gleaned from data, having an impact
on every industry and research discipline. At the core of this revolution lies the tools and …

[PDF][PDF] Comparative transmissibility of SARS-CoV-2 variants delta and alpha in New England, USA

…, C Liu, C Castaldi, C Pearson, C Bernard, CM Nolet… - Cell Reports …, 2022 - cell.com
The SARS-CoV-2 Delta variant rose to dominance in mid-2021, likely propelled by an
estimated 40%–80% increased transmissibility over Alpha. To investigate if this ostensible …

[PDF][PDF] Transmission from vaccinated individuals in a large SARS-CoV-2 Delta variant outbreak

…, MD Lee, MC Ray, ME Fisher, MA Ulcena, CM Nolet… - Cell, 2022 - cell.com
An outbreak of over 1,000 COVID-19 cases in Provincetown, Massachusetts (MA), in July
2021—the first large outbreak mostly in vaccinated individuals in the US—prompted a …

Cost-efficient whole genome-sequencing using novel mostly natural sequencing-by-synthesis chemistry and open fluidics platform

…, S Low, A Bernier, B Gandi, J Stohlman, C Nolet… - BioRxiv, 2022 - biorxiv.org
We introduce a massively parallel novel sequencing platform that combines an open flow
cell design on a circular wafer with a large surface area and mostly natural nucleotides that …

Bringing UMAP closer to the speed of light with GPU acceleration

CJ Nolet, V Lafargue, E Raff, T Nanditale… - Proceedings of the …, 2021 - ojs.aaai.org
The Uniform Manifold Approximation and Projection (UMAP) algorithm has become widely
popular for its ease of use, quality of results, and support for exploratory, unsupervised, …

Cagra: Highly parallel graph construction and approximate nearest neighbor search for gpus

H Ootomo, A Naruse, C Nolet, R Wang, T Feher… - arXiv preprint arXiv …, 2023 - arxiv.org
Approximate Nearest Neighbor Search (ANNS) plays a critical role in various disciplines
spanning data mining and artificial intelligence, from information retrieval and computer vision …

Accelerating single-cell genomic analysis with GPUs

C Nolet, A Lal, R Ilango, T Dyer, R Movva, J Zedlewski… - bioRxiv, 2022 - biorxiv.org
Single-cell genomic technologies are rapidly improving our understanding of cellular
heterogeneity in biological systems. In recent years, technological and computational …

Evidence of transmission from fully vaccinated individuals in a large outbreak of the SARS-CoV-2 Delta variant in Provincetown, Massachusetts

…, MD Lee, MC Ray, ME Fisher, MA Ulcena, CM Nolet… - medRxiv, 2021 - medrxiv.org
Multiple summer events, including large indoor gatherings, in Provincetown, Massachusetts
(MA), in July 2021 contributed to an outbreak of over one thousand COVID-19 cases among …

[PDF][PDF] Accurate nonendoscopic detection of esophageal squamous cell carcinoma using methylated DNA biomarkers

…, EJ Shin, MA Khashab, VK Singh, AH Tieu, C Nolet… - Gastroenterology, 2022 - Elsevier
KM: study concept and design, data acquisition, analysis, and interpretation of data, drafting
of manuscript, and critical revision of manuscript for important intellectual content. AK: data …

cuSLINK: Single-linkage Agglomerative Clustering on the GPU

CJ Nolet, D Gala, A Fender, M Doijade, J Eaton… - … Conference on Machine …, 2023 - Springer
In this paper, we propose cuSLINK, a novel and state-of-the-art reformulation of the SLINK
algorithm on the GPU which requires only O(Nk) space and uses a parameter k to trade off …