CRISPR-guided DNA polymerases enable diversification of all nucleotides in a tunable window

SO Halperin, CJ Tou, EB Wong, C Modavi, DV Schaffer… - Nature, 2018 - nature.com
The capacity to diversify genetic codes advances our ability to understand and engineer
biological systems 1 , 2 . A method for continuously diversifying user-defined regions of a …

Bioproduction of a betalain color palette in Saccharomyces cerevisiae

PS Grewal, C Modavi, ZN Russ, NC Harris… - Metabolic …, 2018 - Elsevier
Betalains are a family of natural pigments found exclusively in the plant order Caryophyllales.
All members of this chemical family are biosynthesized through the common intermediate …

Droplet-based microfluidics

T Moragues, D Arguijo, T Beneyton, C Modavi… - Nature Reviews …, 2023 - nature.com
Droplet-based microfluidic systems generate, manipulate and control sub-microlitre droplets
enclosed within an immiscible carrier fluid. Owing to a number of remarkable features, such …

[HTML][HTML] Mapping enzyme catalysis with metabolic biosensing

L Xu, KC Chang, EM Payne, C Modavi, L Liu… - Nature …, 2021 - nature.com
Enzymes are represented across a vast space of protein sequences and structural forms
and have activities that far exceed the best chemical catalysts; however, engineering them to …

[HTML][HTML] Bright split red fluorescent proteins for the visualization of endogenous proteins and synapses

S Feng, A Varshney, D Coto Villa, C Modavi… - Communications …, 2019 - nature.com
Self-associating split fluorescent proteins (FPs) are split FPs whose two fragments spontaneously
associate to form a functional FP. They have been widely used for labeling proteins, …

Printhead on a chip: empowering droplet-based bioprinting with microfluidics

P Zhang, C Liu, C Modavi, A Abate, H Chen - Trends in Biotechnology, 2023 - cell.com
Droplet-based bioprinting has long struggled with the manipulation and dispensation of
individual cells from a printhead, hindering the fabrication of artificial cellular structures with high …

Dual‐layered hydrogels allow complete genome recovery with nucleic acid cytometry

MN Hatori, C Modavi, P Xu, D Weisgerber… - Biotechnology …, 2022 - Wiley Online Library
Targeting specific cells for sequencing is important for applications in cancer, microbiology,
and infectious disease. Nucleic acid cytometry (NAC) is a powerful approach for …

Microbowls with controlled concavity for accurate microscale mass spectrometry

…, N Tao, P Zhang, EM Payne, C Modavi… - Advanced …, 2022 - Wiley Online Library
Patterned surfaces can enhance the sensitivity of laser desorption ionization mass spectrometry
by segregating and concentrating analytes, but their fabrication can be challenging. …

Microbiome single cell atlases generated with a commercial instrument

…, C Noecker, JE Bisanz, DW Weisgerber, C Modavi… - bioRxiv, 2023 - biorxiv.org
Single cell sequencing is useful for resolving complex systems into their composite cell types
and computationally mining them for unique features that are masked in pooled sequencing…

Microfluidic automated plasmid library enrichment for biosynthetic gene cluster discovery

P Xu, C Modavi, B Demaree, F Twigg… - Nucleic acids …, 2020 - academic.oup.com
Microbial biosynthetic gene clusters are a valuable source of bioactive molecules. However,
because they typically represent a small fraction of genomic material in most metagenomic …