User profiles for D. K. Seymour

Danelle Seymour

University of California, Riverside
Verified email at ucr.edu
Cited by 1512

Demography and its effects on genomic variation in crop domestication

BS Gaut, DK Seymour, Q Liu, Y Zhou - Nature plants, 2018 - nature.com
Over two thousand plant species have been modified morphologically through cultivation
and human use. Here, we review three aspects of crop domestication that are currently …

[PDF][PDF] Gene body methylation in plants: mechanisms, functions, and important implications for understanding evolutionary processes

AM Muyle, DK Seymour, Y Lv, B Huettel… - Genome biology and …, 2022 - academic.oup.com
Gene body methylation (gbM) is an epigenetic mark where gene exons are methylated in the
CG context only, as opposed to CHG and CHH contexts (where H stands for A, C, or T). CG …

The causes and consequences of DNA methylome variation in plants

DK Seymour, C Becker - Current opinion in plant biology, 2017 - Elsevier
Highlights • Epigenetic variation in plants is frequently linked to genetic variation. • Single
large effect mutations perturb the epigenetic landscape in trans. • DNA methylation regulates …

LNK genes integrate light and clock signaling networks at the core of the Arabidopsis oscillator

…, CE Hernando, DK Seymour… - Proceedings of the …, 2013 - National Acad Sciences
Light signaling pathways and the circadian clock interact to help organisms synchronize
physiological and developmental processes with periodic environmental cycles. The plant …

[HTML][HTML] Evolution of DNA methylation patterns in the Brassicaceae is driven by differences in genome organization

DK Seymour, D Koenig, J Hagmann, C Becker… - PLoS …, 2014 - journals.plos.org
DNA methylation is an ancient molecular modification found in most eukaryotes. In plants,
DNA methylation is not only critical for transcriptionally silencing transposons, but can also …

Rapid creation of Arabidopsis doubled haploid lines for quantitative trait locus mapping

DK Seymour, DL Filiault, IM Henry… - Proceedings of the …, 2012 - National Acad Sciences
Quantitative trait loci (QTL) mapping is a powerful tool for investigating the genetic basis of
natural variation. QTL can be mapped using a number of different population designs, but …

Comparative mapping in watermelon [Citrullus lanatus (Thunb.) Matsum. et Nakai]

…, DG Caldwell, CA Taylor, DK Seymour… - Theoretical and applied …, 2012 - Springer
The first single-nucleotide polymorphism (SNP) maps for watermelon [Citrullus lanatus (Thunb.)
Matsum. et Nakai] were constructed and compared. Three populations were developed …

[HTML][HTML] Improving the Annotation of Arabidopsis lyrata Using RNA-Seq Data

V Rawat, A Abdelsamad, B Pietzenuk, DK Seymour… - PloS one, 2015 - journals.plos.org
… /analysis tools: AA BP DKS DK DW. Wrote the paper: VR KS AA AP BP DKS DK DW. …
Seymour DK, Koenig D, Hagmann J, Becker C, Weigel D. Evolution of DNA methylation patterns in …

KH domain protein RCF3 is a tissue-biased regulator of the plant miRNA biogenesis cofactor HYL1

P Karlsson, MD Christie, DK Seymour… - Proceedings of the …, 2015 - National Acad Sciences
The biogenesis of microRNAs (miRNAs), which regulate mRNA abundance through
posttranscriptional silencing, comprises multiple well-orchestrated processing steps. We have …

Genetic architecture of nonadditive inheritance in Arabidopsis thaliana hybrids

DK Seymour, E Chae, DG Grimm… - Proceedings of the …, 2016 - National Acad Sciences
The ubiquity of nonparental hybrid phenotypes, such as hybrid vigor and hybrid inferiority,
has interested biologists for over a century and is of considerable agricultural importance. …