User profiles for D. R. Bevan
David BevanProfessor of Biochemistry Verified email at vt.edu Cited by 6592 |
Natural product-based amyloid inhibitors
Many chronic human diseases, including multiple neurodegenerative diseases, are
associated with deleterious protein aggregates, also called protein amyloids. One common …
associated with deleterious protein aggregates, also called protein amyloids. One common …
The role of molecular simulations in the development of inhibitors of amyloid β-peptide aggregation for the treatment of Alzheimer's disease
The pathogenic aggregation of the amyloid β-peptide (Aβ) is considered a hallmark of the
progression of Alzheimer’s disease, the leading cause of senile dementia in the elderly and …
progression of Alzheimer’s disease, the leading cause of senile dementia in the elderly and …
[HTML][HTML] A review of metabolic and enzymatic engineering strategies for designing and optimizing performance of microbial cell factories
AK Fisher, BG Freedman, DR Bevan… - Computational and …, 2014 - Elsevier
Microbial cell factories (MCFs) are of considerable interest to convert low value renewable
substrates to biofuels and high value chemicals. This review highlights the progress of …
substrates to biofuels and high value chemicals. This review highlights the progress of …
Assessing the stability of Alzheimer's amyloid protofibrils using molecular dynamics
Amyloid fibrils represent a stable form of many misfolded proteins associated with
numerous diseases. Among these are Parkinson’s disease (α-synuclein), Type II diabetes (islet …
numerous diseases. Among these are Parkinson’s disease (α-synuclein), Type II diabetes (islet …
GridMAT‐MD: a grid‐based membrane analysis tool for use with molecular dynamics
GridMAT‐MD is a new program developed to aid in the analysis of lipid bilayers from molecular
dynamics simulations. It reads a GROMACS coordinate file and generates two types of …
dynamics simulations. It reads a GROMACS coordinate file and generates two types of …
Practical considerations for building GROMOS-compatible small-molecule topologies
Molecular dynamics simulations are being applied to increasingly complex systems, including
those involving small endogenous compounds and drug molecules. In order to obtain …
those involving small endogenous compounds and drug molecules. In order to obtain …
The mechanism of substrate (aglycone) specificity in β-glucosidases is revealed by crystal structures of mutant maize β-glucosidase-DIMBOA,-DIMBOAGlc, and …
…, M Cicek, V Zamboni, DR Bevan… - Proceedings of the …, 2000 - National Acad Sciences
The mechanism and the site of substrate (ie, aglycone) recognition and specificity were
investigated in maize β-glucosidase (Glu1) by x-ray crystallography by using crystals of a …
investigated in maize β-glucosidase (Glu1) by x-ray crystallography by using crystals of a …
Destabilizing Alzheimer's Aβ42 Protofibrils with Morin: Mechanistic Insights from Molecular Dynamics Simulations
… We thank Peter Bowerman and Dr. Brenda SJ Winkel for stimulating discussions on
flavonoid chemistry, William J. Allen for useful discussions during the development of morin …
flavonoid chemistry, William J. Allen for useful discussions during the development of morin …
Herbivore-induced and floral homoterpene volatiles are biosynthesized by a single P450 enzyme (CYP82G1) in Arabidopsis
Terpene volatiles play important roles in plant-organism interactions as attractants of pollinators
or as defense compounds against herbivores. Among the most common plant volatiles …
or as defense compounds against herbivores. Among the most common plant volatiles …
[HTML][HTML] Abscisic acid regulates inflammation via ligand-binding domain-independent activation of peroxisome proliferator-activated receptor γ
Abscisic acid (ABA) has shown efficacy in the treatment of diabetes and inflammation;
however, its molecular targets and the mechanisms of action underlying its immunomodulatory …
however, its molecular targets and the mechanisms of action underlying its immunomodulatory …