User profiles for D. C. Nachun

Daniel Nachun

Stanford University
Verified email at stanford.edu
Cited by 966

[PDF][PDF] A quantitative proteome map of the human body

…, SB Montgomery, M Muņoz-Aguirre, DC Nachun… - Cell, 2020 - cell.com
Determining protein levels in each tissue and how they compare with RNA levels is important
for understanding human biology and disease as well as regulatory processes that control …

[PDF][PDF] Population-scale tissue transcriptomics maps long non-coding RNAs to complex disease

OM de Goede, DC Nachun, NM Ferraro… - Cell, 2021 - cell.com
Long non-coding RNA (lncRNA) genes have well-established and important impacts on
molecular and cellular functions. However, among the thousands of lncRNA genes, it is still a …

Interaction molecular QTL mapping discovers cellular and environmental modifiers of genetic regulatory effects

…, S Kim-Hellmuth, BC Brown, DC Nachun… - The American Journal of …, 2024 - cell.com
Bulk-tissue molecular quantitative trait loci (QTLs) have been the starting point for interpreting
disease-associated variants, and context-specific QTLs show particular relevance for …

[PDF][PDF] Nonsense-mediated decay is highly stable across individuals and tissues

NA Teran, DC Nachun, T Eulalio, NM Ferraro… - The American Journal of …, 2021 - cell.com
Precise interpretation of the effects of rare protein-truncating variants (PTVs) is important for
accurate determination of variant impact. Current methods for assessing the ability of PTVs …

[PDF][PDF] Multiset correlation and factor analysis enables exploration of multi-omics data

BC Brown, C Wang, S Kasela, F Aguet, DC Nachun… - Cell Genomics, 2023 - cell.com
Multi-omics datasets are becoming more common, necessitating better integration methods
to realize their revolutionary potential. Here, we introduce multi-set correlation and factor …

[PDF][PDF] An integrated approach to identify environmental modulators of genetic risk factors for complex traits

…, I Carcamo-Orive, MJ Gloudemans, DC Nachun… - The American Journal of …, 2021 - cell.com
Complex traits and diseases can be influenced by both genetics and environment. However,
given the large number of environmental stimuli and power challenges for gene-by-…

Long non-coding RNA gene regulation and trait associations across human tissues

OM de Goede, NM Ferraro, DC Nachun, AS Rao… - bioRxiv, 2019 - biorxiv.org
Long non-coding RNA (lncRNA) genes are known to have diverse impacts on gene regulation.
However, it is still a major challenge to distinguish functional lncRNAs from those that are …

[BOOK][B] Peripheral inflammation in neurodegenerative diseases

DC Nachun - 2018 - search.proquest.com
This thesis constitutes an exhaustive analysis of peripheral blood gene expression across a
diverse set of neurodegenerative disease. The first manuscript included in the thesis …

[HTML][HTML] Clonal hematopoiesis is associated with protection from Alzheimer's disease

…, S Wirth, L Ma, MR Chrostek, H Ahmad, D Nachun… - Nature Medicine, 2023 - nature.com
… Clusters C7–monocyte and C8–DC are also included for visual reference. e, Calculation
of the proportion of MG bearing a CHIP mutation in each sample. Error bars depict the …