Genomic Species Are Ecological Species as Revealed by Comparative Genomics in Agrobacterium tumefaciens
…, J Baude, D Costechareyre, D Chapulliot… - Genome Biology and …, 2011 - academic.oup.com
The definition of bacterial species is based on genomic similarities, giving rise to the operational
concept of genomic species, but the reasons of the occurrence of differentiated genomic …
concept of genomic species, but the reasons of the occurrence of differentiated genomic …
Rapid and Efficient Identification of Agrobacterium Species by recA Allele Analysis: Agrobacterium recA Diversity
…, A Rhouma, C Lavire, P Portier, D Chapulliot… - Microbial Ecology, 2010 - Springer
The analysis of housekeeping recA gene sequences from 138 strains from 13 species or
genomic species of Agrobacterium, nine being biovar 1 genomospecies, and the others …
genomic species of Agrobacterium, nine being biovar 1 genomospecies, and the others …
Identification of Genomic Species in Agrobacterium Biovar 1 by AFLP Genomic Markers
…, C Mougel, C Lerondelle, D Chapulliot… - Applied and …, 2006 - Am Soc Microbiol
Biovar 1 of the genus Agrobacterium consists of at least nine genomic species that have not
yet received accepted species names. However, rapid identification of these organisms in …
yet received accepted species names. However, rapid identification of these organisms in …
[HTML][HTML] Genomic characterization of Ensifer aridi, a proposed new species of nitrogen-fixing rhizobium recovered from Asian, African and American deserts
Background Nitrogen fixing bacteria isolated from hot arid areas in Asia, Africa and America
but from diverse leguminous plants have been recently identified as belonging to a possible …
but from diverse leguminous plants have been recently identified as belonging to a possible …
Anthropization level of Lascaux Cave microbiome shown by regional‐scale comparisons of pristine and anthropized caves
…, B Kaufmann, A Dubost, D Chapulliot… - Molecular …, 2019 - Wiley Online Library
Limestone areas across the world develop karstic caves, which are populated by a wide range
of macro‐ and microorganisms. Many of these caves display Paleolithic art or outstanding …
of macro‐ and microorganisms. Many of these caves display Paleolithic art or outstanding …
Single acquisition of protelomerase gave rise to speciation of a large and diverse clade within the Agrobacterium/Rhizobium supercluster characterized by the …
Linear chromosomes are atypical in bacteria and likely a secondary trait derived from ancestral
circular molecules. Within the Rhizobiaceae family, whose genome contains at least two …
circular molecules. Within the Rhizobiaceae family, whose genome contains at least two …
Rapid and accurate species and genomic species identification and exhaustive population diversity assessment of Agrobacterium spp. using recA-based PCR
Agrobacteria are common soil bacteria that interact with plants as commensals, plant
growth promoting rhizobacteria or alternatively as pathogens. Indigenous agrobacterial …
growth promoting rhizobacteria or alternatively as pathogens. Indigenous agrobacterial …
Prokaryotic, microeukaryotic, and fungal composition in a long-term polychlorinated biphenyl-contaminated brownfield
…, L Peluhet, S Czarnes, D Melayah, D Chapulliot… - Microbial ecology, 2023 - Springer
Polychlorinated biphenyls (PCBs) are recognized as persistent organic pollutants and
accumulate in organisms, soils, waters, and sediments, causing major health and ecological …
accumulate in organisms, soils, waters, and sediments, causing major health and ecological …
Development and validation of a UHPLC-ESI-QTOF mass spectrometry method to analyze opines, plant biomarkers of crown gall or hairy root diseases
…, V Gaillard, TN Le, F Bellvert, D Chapulliot… - … of Chromatography B, 2021 - Elsevier
Opines are low-molecular-weight metabolites specifically biosynthesized by agrobacteria-transformed
plant cells when plants are struck by crown gall and hairy root diseases, which …
plant cells when plants are struck by crown gall and hairy root diseases, which …
Ancestral Genome Estimation Reveals the History of Ecological Diversification in Agrobacterium
…, R Planel, S Penel, D Chapulliot… - Genome biology and …, 2017 - academic.oup.com
… For a similar reason of a high risk of false positives, we did not investigate O and D block
events on the deep, long branches of the species tree (supplementary fig. S1, Supplementary …
events on the deep, long branches of the species tree (supplementary fig. S1, Supplementary …