User profiles for D. Ibberson

David J. Ibberson

Quantum Motion Technologies
Verified email at quantummotion.tech
Cited by 182

Cyclical DNA methylation of a transcriptionally active promoter

…, RZ Jurkowska, RP Carmouche, D Ibberson… - Nature, 2008 - nature.com
d, Genomic DNA prepared from cells sampled every 5 min after treatments was digested by
HpaII or not (Mock), and the four target sequences were amplified by real-time PCR. Results, …

Transient cyclical methylation of promoter DNA

…, R Métivier, M Polycarpou-Schwarz, D Ibberson… - Nature, 2008 - nature.com
D 600 nm of between 0.6 and 0.8 was achieved. Protein expression was induced by the
addition of 0.4 mM isopropyl β-d-… The beads were washed until the eluate had a D 280 nm < 0.04…

MicroSAGE analysis of 2,353 expressed genes in a single cell-derived colony of undifferentiated human mesenchymal stem cells reveals mRNAs of multiple cell …

N Tremain, J Korkko, D Ibberson, GC Kopen… - Stem …, 2001 - academic.oup.com
Mesenchymal stem cells (MSCs) isolated from the bone marrow of adult organisms are
capable of differentiating into adipocytes, chondrocytes, myoblasts, osteoblasts, and …

Direct and indirect effects of H-NS and Fis on global gene expression control in Escherichia coli

…, ASN Seshasayee, AI Prieto, D Ibberson… - Nucleic acids …, 2011 - academic.oup.com
… of total RNA was annealed to random primers, and cDNA was synthesized in a reverse
transcription reaction with an amino allyl modified dUTP in the presence of 1 μg of Actinomycin D

Multiple mechanisms induce transcriptional silencing of a subset of genes, including oestrogen receptor α, in response to deacetylase inhibition by valproic acid and …

G Reid, R Metivier, CY Lin, S Denger, D Ibberson… - Oncogene, 2005 - nature.com
… (d) Clearance of ERα is prevented by coincubation with the proteasome inhibitor MG132,
demonstrating an involvement of the proteasome in VPA and TSA mediated decrease of ERα. (…

Fast high-fidelity single-shot readout of spins in silicon using a single-electron box

…, C Lainé, S Schaal, F Martins, DJ Ibberson… - Physical Review X, 2023 - APS
… capacitance (Cp = 410 fF) in parallel with the SEB and presents an internal Q factor, Q0 =
270, a high-impedance Zr = 520 Ω, and a coupling coefficient β = 2.5 (see Appendix D for the …

[HTML][HTML] RNA degradation compromises the reliability of microRNA expression profiling

D Ibberson, V Benes, MU Muckenthaler, M Castoldi - BMC biotechnology, 2009 - Springer
Background MicroRNAs are small non-coding RNAs that post-transcriptionally regulate gene
expression and their expression is frequently altered in human diseases, including cancer. …

[HTML][HTML] The genome of the jellyfish Aurelia and the evolution of animal complexity

…, Y Li, X Yan, M Regulski, D Ibberson… - Nature ecology & …, 2019 - nature.com
We present the genome of the moon jellyfish Aurelia, a genome from a cnidarian with a
medusa life stage. Our analyses suggest that gene gain and loss in Aurelia is comparable to …

Large dispersive interaction between a CMOS double quantum dot and microwave photons

DJ Ibberson, T Lundberg, JA Haigh, L Hutin, B Bertrand… - PRX Quantum, 2021 - APS
We report fast charge-state readout of a double quantum dot in a CMOS split-gate silicon
nanowire transistor via the large dispersive interaction with microwave photons in a lumped-…

Chromosome 8p engineering reveals increased metastatic potential targetable by patient-specific synthetic lethality in liver cancer

…, S Fritzsche, RN Sugiyanto, D Castven, D Ibberson… - Science …, 2023 - science.org
Large-scale chromosomal aberrations are prevalent in human cancer, but their function
remains poorly understood. We established chromosome-engineered hepatocellular carcinoma …