User profiles for D. Silvestro

Daniele Silvestro

University of Fribourg (Switzerland)
Verified email at unifr.ch
Cited by 10706

CoordinateCleaner: Standardized cleaning of occurrence records from biological collection databases

A Zizka, D Silvestro, T Andermann… - Methods in Ecology …, 2019 - Wiley Online Library
… and identify D as the most common distance. A dataset is then flagged as potentially biased
if D is … of outliers spaced by a distance D exceeds a user-defined value (by default set to 3). …

raxmlGUI 2.0: A graphical interface and toolkit for phylogenetic analyses using RAxML

…, J Klein, A Antonelli, D Silvestro - Methods in Ecology and …, 2021 - Wiley Online Library
… DS conceived the idea; DE, JK and DS designed the interface; DE and JK implemented
the ideas and design; DE, JK and DS led the writing of the manuscript; DE, JK, DS and AA …

Biological evidence supports an early and complex emergence of the Isthmus of Panama

CD Bacon, D Silvestro, C Jaramillo… - Proceedings of the …, 2015 - National Acad Sciences
The linking of North and South America by the Isthmus of Panama had major impacts on
global climate, oceanic and atmospheric currents, and biodiversity, yet the timing of this critical …

Amazonia is the primary source of Neotropical biodiversity

…, R Scharn, CD Bacon, D Silvestro… - Proceedings of the …, 2018 - National Acad Sciences
The American tropics (the Neotropics) are the most species-rich realm on Earth, and for
centuries, scientists have attempted to understand the origins and evolution of their biodiversity. …

raxmlGUI: a graphical front-end for RAxML

D Silvestro, I Michalak - Organisms Diversity & Evolution, 2012 - Springer
With the increasing availability of molecular data, maximum likelihood approaches have gained
a new central role in phylogenetic reconstructions. Extremely fast tree-search algorithms …

Extinction at the end-Cretaceous and the origin of modern Neotropical rainforests

…, Á Duque, JL Crowley, C Santos, D Silvestro - Science, 2021 - science.org
The end-Cretaceous event was catastrophic for terrestrial communities worldwide, yet its
long-lasting effect on tropical forests remains largely unknown. We quantified plant extinction …

[HTML][HTML] Improving biodiversity protection through artificial intelligence

D Silvestro, S Goria, T Sterner, A Antonelli - Nature sustainability, 2022 - nature.com
… c,d, Histograms of the fraction of species ranges included in the protected units calculated
for each species with Marxan (c) and CAPTAIN (d). The red dashed lines indicate the 10% …

Recent origin and rapid speciation of Neotropical orchids in the world's richest plant biodiversity hotspot

…, D Bogarín, NJ Matzke, D Silvestro… - New …, 2017 - Wiley Online Library
… that fastest speciation took place in the Northern Andes region, and reveals secondary
speciation hotspots in the Central Andes, the Guiana Shield and Central America (Figs 3d, 4d). …

Characterization of a dynamic metabolon producing the defense compound dhurrin in sorghum

…, K Bavishi, F Torta, HJ Martens, D Silvestro… - Science, 2016 - science.org
Metabolic highways may be orchestrated by the assembly of sequential enzymes into protein
complexes, or metabolons, to facilitate efficient channeling of intermediates and to prevent …

Madagascar's extraordinary biodiversity: Threats and opportunities

…, H Razanajatovo, E Razanatsoa, M Rivers, D Silvestro… - Science, 2022 - science.org
Madagascar’s unique biota is heavily affected by human activity and is under intense threat.
Here, we review the current state of knowledge on the conservation status of Madagascar’s …