User profiles for Daisuke Komura
Daisuke KomuraThe University of Tokyo Verified email at mu-tokyo.ac.jp Cited by 11106 |
Global variation in copy number in the human genome
Copy number variation (CNV) of DNA sequences is functionally significant but has yet to be
fully ascertained. We have constructed a first-generation CNV map of the human genome …
fully ascertained. We have constructed a first-generation CNV map of the human genome …
[HTML][HTML] Machine learning methods for histopathological image analysis
D Komura, S Ishikawa - Computational and structural biotechnology journal, 2018 - Elsevier
Abundant accumulation of digital histopathological images has led to the increased demand
for their analysis, such as computer-aided diagnosis using machine learning techniques. …
for their analysis, such as computer-aided diagnosis using machine learning techniques. …
From detection of individual metastases to classification of lymph node status at the patient level: the camelyon17 challenge
Automated detection of cancer metastases in lymph nodes has the potential to improve the
assessment of prognosis for patients. To enable fair comparison between the algorithms for …
assessment of prognosis for patients. To enable fair comparison between the algorithms for …
Multiancestry genomic and transcriptomic analysis of gastric cancer
Y Totoki, M Saito-Adachi, Y Shiraishi, D Komura… - Nature Genetics, 2023 - nature.com
Gastric cancer is among the most common malignancies worldwide, characterized by
geographical, epidemiological and histological heterogeneity. Here, we report an extensive, …
geographical, epidemiological and histological heterogeneity. Here, we report an extensive, …
Genome-wide detection of human copy number variations using high-density DNA oligonucleotide arrays
D Komura, F Shen, S Ishikawa, KR Fitch… - Genome …, 2006 - genome.cshlp.org
Recent reports indicate that copy number variations (CNVs) within the human genome
contribute to nucleotide diversity to a larger extent than single nucleotide polymorphisms (SNPs). …
contribute to nucleotide diversity to a larger extent than single nucleotide polymorphisms (SNPs). …
A wave of nascent transcription on activated human genes
…, T Minami, K Inoue, D Komura… - Proceedings of the …, 2009 - National Acad Sciences
Genome-wide studies reveal that transcription by RNA polymerase II (Pol II) is dynamically
regulated. To obtain a comprehensive view of a single transcription cycle, we switched on …
regulated. To obtain a comprehensive view of a single transcription cycle, we switched on …
[PDF][PDF] Helicobacter pylori CagA elicits BRCAness to induce genome instability that may underlie bacterial gastric carcinogenesis
S Imai, T Ooki, N Murata-Kamiya, D Komura… - Cell Host & Microbe, 2021 - cell.com
Infection with CagA-producing Helicobacter pylori plays a causative role in the development
of gastric cancer. Upon delivery into gastric epithelial cells, CagA deregulates prooncogenic …
of gastric cancer. Upon delivery into gastric epithelial cells, CagA deregulates prooncogenic …
Machine learning approaches for pathologic diagnosis
D Komura, S Ishikawa - Virchows Archiv, 2019 - Springer
Abstract Machine learning techniques, especially deep learning techniques such as convolutional
neural networks, have been successfully applied to general image recognitions since …
neural networks, have been successfully applied to general image recognitions since …
Loss of YAP1 defines neuroendocrine differentiation of lung tumors
…, T Nakano, T Tsuchiya, H Tsubochi, D Komura… - Cancer …, 2016 - Wiley Online Library
YAP 1, the main Hippo pathway effector, is a potent oncogene and is overexpressed in non‐small‐cell
lung cancer ( NSCLC ); however, the YAP 1 expression pattern in small‐cell lung …
lung cancer ( NSCLC ); however, the YAP 1 expression pattern in small‐cell lung …
[HTML][HTML] The niche component periostin is produced by cancer-associated fibroblasts, supporting growth of gastric cancer through ERK activation
Overexpression of periostin (POSTN), an extracellular matrix protein, has been observed in
several cancers. We investigated the importance of POSTN in gastric cancer. Genome-wide …
several cancers. We investigated the importance of POSTN in gastric cancer. Genome-wide …