[PDF][PDF] Diet dominates host genotype in shaping the murine gut microbiota
Mammals exhibit marked interindividual variations in their gut microbiota, but it remains
unclear if this is primarily driven by host genetics or by extrinsic factors like dietary intake. To …
unclear if this is primarily driven by host genetics or by extrinsic factors like dietary intake. To …
High-resolution genetic mapping using the Mouse Diversity outbred population
The JAX Diversity Outbred population is a new mouse resource derived from partially
inbred Collaborative Cross strains and maintained by randomized outcrossing. As such, it …
inbred Collaborative Cross strains and maintained by randomized outcrossing. As such, it …
The diversity outbred mouse population
GA Churchill, DM Gatti, SC Munger, KL Svenson - Mammalian genome, 2012 - Springer
The Diversity Outbred (DO) population is a heterogeneous stock derived from the same eight
founder strains as the Collaborative Cross (CC) inbred strains. Genetically heterogeneous …
founder strains as the Collaborative Cross (CC) inbred strains. Genetically heterogeneous …
Defining the consequences of genetic variation on a proteome-wide scale
Genetic variation modulates protein expression through both transcriptional and post-transcriptional
mechanisms. To characterize the consequences of natural genetic diversity on the …
mechanisms. To characterize the consequences of natural genetic diversity on the …
R/qtl2: software for mapping quantitative trait loci with high-dimensional data and multiparent populations
R/qtl2 is an interactive software environment for mapping quantitative trait loci (QTL) in
experimental populations. The R/qtl2 software expands the scope of the widely-used R/qtl …
experimental populations. The R/qtl2 software expands the scope of the widely-used R/qtl …
[HTML][HTML] Genetic properties of the MAGIC maize population: a new platform for high definition QTL mapping in Zea mays
M Dell'Acqua, DM Gatti, G Pea, F Cattonaro… - Genome biology, 2015 - Springer
Background Maize (Zea mays) is a globally produced crop with broad genetic and phenotypic
variation. New tools that improve our understanding of the genetic basis of quantitative …
variation. New tools that improve our understanding of the genetic basis of quantitative …
Quantitative trait locus mapping methods for diversity outbred mice
DM Gatti, KL Svenson, A Shabalin… - G3: Genes …, 2014 - academic.oup.com
Genetic mapping studies in the mouse and other model organisms are used to search for
genes underlying complex phenotypes. Traditional genetic mapping studies that employ single…
genes underlying complex phenotypes. Traditional genetic mapping studies that employ single…
[HTML][HTML] Genetic mapping of microbial and host traits reveals production of immunomodulatory lipids by Akkermansia muciniphila in the murine gut
…, DS Stapleton, ME Rabaglia, M Seldin, DM Gatti… - Nature …, 2023 - nature.com
The molecular bases of how host genetic variation impacts the gut microbiome remain
largely unknown. Here we used a genetically diverse mouse population and applied systems …
largely unknown. Here we used a genetically diverse mouse population and applied systems …
Diversity outbred mice identify population-based exposure thresholds and genetic factors that influence benzene-induced genotoxicity
JE French, DM Gatti, DL Morgan… - Environmental …, 2015 - ehp.niehs.nih.gov
Background Inhalation of benzene at levels below the current exposure limit values leads to
hematotoxicity in occupationally exposed workers. Objective We sought to evaluate …
hematotoxicity in occupationally exposed workers. Objective We sought to evaluate …
Lung necrosis and neutrophils reflect common pathways of susceptibility to Mycobacterium tuberculosis in genetically diverse, immune-competent mice
…, R Cooper, C Abeijon, DM Gatti… - Disease models & …, 2015 - journals.biologists.com
Pulmonary tuberculosis (TB) is caused by Mycobacterium tuberculosis in susceptible
humans. Here, we infected Diversity Outbred (DO) mice with ∼100 bacilli by aerosol to model …
humans. Here, we infected Diversity Outbred (DO) mice with ∼100 bacilli by aerosol to model …