User profiles for Daniel W. Watkins

Daniel W Watkins

Post Doctoral Research Associate, University of Bristol
Verified email at bristol.ac.uk
Cited by 646

[HTML][HTML] Construction and in vivo assembly of a catalytically proficient and hyperthermostable de novo enzyme

DW Watkins, JMX Jenkins, KJ Grayson, N Wood… - Nature …, 2017 - nature.com
Although catalytic mechanisms in natural enzymes are well understood, achieving the diverse
palette of reaction chemistries in re-engineered native proteins has proved challenging. …

Constructing a man-made c-type cytochrome maquette in vivo: electron transfer, oxygen transport and conversion to a photoactive light harvesting maquette.

…, G Kodali, BR Lichtenstein, DW Watkins… - Chemical …, 2014 - pubs.rsc.org
The successful use of man-made proteins to advance synthetic biology requires both the
fabrication of functional artificial proteins in a living environment, and the ability of these …

Specific cardiolipin–SecY interactions are required for proton-motive force stimulation of protein secretion

…, E Pyle, WJ Allen, DW Watkins… - Proceedings of the …, 2018 - National Acad Sciences
The transport of proteins across or into membranes is a vital biological process, achieved in
every cell by the conserved Sec machinery. In bacteria, SecYEG combines with the SecA …

[HTML][HTML] A high-resolution luminescent assay for rapid and continuous monitoring of protein translocation across biological membranes

GC Pereira, WJ Allen, DW Watkins, L Buddrus… - Journal of molecular …, 2019 - Elsevier
Protein translocation is a fundamental process in biology. Major gaps in our understanding
of this process arise due the poor sensitivity, low time resolution and irreproducibility of …

Refined measurement of SecA-driven protein secretion reveals that translocation is indirectly coupled to ATP turnover

WJ Allen, DW Watkins… - Proceedings of the …, 2020 - National Acad Sciences
The universally conserved Sec system is the primary method cells utilize to transport proteins
across membranes. Until recently, measuring the activity—a prerequisite for understanding …

Inter-membrane association of the Sec and BAM translocons for bacterial outer-membrane biogenesis

S Alvira, DW Watkins, L Troman, WJ Allen, JS Lorriman… - Elife, 2020 - elifesciences.org
The outer-membrane of Gram-negative bacteria is critical for surface adhesion, pathogenicity,
antibiotic resistance and survival. The major constituent – hydrophobic β-barrel Outer-…

Dynamic coupling of fast channel gating with slow ATP-turnover underpins protein transport through the Sec translocon

JA Crossley, WJ Allen, DW Watkins, T Sabir… - The EMBO …, 2024 - embopress.org
The Sec translocon is a highly conserved membrane assembly for polypeptide transport
across, or into, lipid bilayers. In bacteria, secretion through the core channel complex—SecYEG …

Association of fluorescent protein pairs and its significant impact on fluorescence and energy transfer

…, RD Ahmed, I Taban, HS Auhim, DW Watkins… - Advanced …, 2021 - Wiley Online Library
Fluorescent proteins (FPs) are commonly used in pairs to monitor dynamic biomolecular
events through changes in proximity via distance dependent processes such as Förster …

[HTML][HTML] Positive functional synergy of structurally integrated artificial protein dimers assembled by Click chemistry

…, R Batchelor, RL Johnson, DW Watkins… - Communications …, 2019 - nature.com
Construction of artificial higher order protein complexes allows sampling of structural
architectures and functional features not accessible by classical monomeric proteins. Here, we …

[HTML][HTML] A suite of de novo c-type cytochromes for functional oxidoreductase engineering

DW Watkins, CT Armstrong, JL Beesley… - … et Biophysica Acta (BBA …, 2016 - Elsevier
Central to the design of an efficient de novo enzyme is a robust yet mutable protein scaffold.
The maquette approach to protein design offers precisely this, employing simple four-α-helix …