User profiles for Daniel W. Watkins
Daniel W WatkinsPost Doctoral Research Associate, University of Bristol Verified email at bristol.ac.uk Cited by 646 |
[HTML][HTML] Construction and in vivo assembly of a catalytically proficient and hyperthermostable de novo enzyme
Although catalytic mechanisms in natural enzymes are well understood, achieving the diverse
palette of reaction chemistries in re-engineered native proteins has proved challenging. …
palette of reaction chemistries in re-engineered native proteins has proved challenging. …
Constructing a man-made c-type cytochrome maquette in vivo: electron transfer, oxygen transport and conversion to a photoactive light harvesting maquette.
…, G Kodali, BR Lichtenstein, DW Watkins… - Chemical …, 2014 - pubs.rsc.org
The successful use of man-made proteins to advance synthetic biology requires both the
fabrication of functional artificial proteins in a living environment, and the ability of these …
fabrication of functional artificial proteins in a living environment, and the ability of these …
Specific cardiolipin–SecY interactions are required for proton-motive force stimulation of protein secretion
The transport of proteins across or into membranes is a vital biological process, achieved in
every cell by the conserved Sec machinery. In bacteria, SecYEG combines with the SecA …
every cell by the conserved Sec machinery. In bacteria, SecYEG combines with the SecA …
[HTML][HTML] A high-resolution luminescent assay for rapid and continuous monitoring of protein translocation across biological membranes
Protein translocation is a fundamental process in biology. Major gaps in our understanding
of this process arise due the poor sensitivity, low time resolution and irreproducibility of …
of this process arise due the poor sensitivity, low time resolution and irreproducibility of …
Refined measurement of SecA-driven protein secretion reveals that translocation is indirectly coupled to ATP turnover
WJ Allen, DW Watkins… - Proceedings of the …, 2020 - National Acad Sciences
The universally conserved Sec system is the primary method cells utilize to transport proteins
across membranes. Until recently, measuring the activity—a prerequisite for understanding …
across membranes. Until recently, measuring the activity—a prerequisite for understanding …
Inter-membrane association of the Sec and BAM translocons for bacterial outer-membrane biogenesis
S Alvira, DW Watkins, L Troman, WJ Allen, JS Lorriman… - Elife, 2020 - elifesciences.org
The outer-membrane of Gram-negative bacteria is critical for surface adhesion, pathogenicity,
antibiotic resistance and survival. The major constituent – hydrophobic β-barrel Outer-…
antibiotic resistance and survival. The major constituent – hydrophobic β-barrel Outer-…
Dynamic coupling of fast channel gating with slow ATP-turnover underpins protein transport through the Sec translocon
JA Crossley, WJ Allen, DW Watkins, T Sabir… - The EMBO …, 2024 - embopress.org
The Sec translocon is a highly conserved membrane assembly for polypeptide transport
across, or into, lipid bilayers. In bacteria, secretion through the core channel complex—SecYEG …
across, or into, lipid bilayers. In bacteria, secretion through the core channel complex—SecYEG …
Association of fluorescent protein pairs and its significant impact on fluorescence and energy transfer
…, RD Ahmed, I Taban, HS Auhim, DW Watkins… - Advanced …, 2021 - Wiley Online Library
Fluorescent proteins (FPs) are commonly used in pairs to monitor dynamic biomolecular
events through changes in proximity via distance dependent processes such as Förster …
events through changes in proximity via distance dependent processes such as Förster …
[HTML][HTML] Positive functional synergy of structurally integrated artificial protein dimers assembled by Click chemistry
…, R Batchelor, RL Johnson, DW Watkins… - Communications …, 2019 - nature.com
Construction of artificial higher order protein complexes allows sampling of structural
architectures and functional features not accessible by classical monomeric proteins. Here, we …
architectures and functional features not accessible by classical monomeric proteins. Here, we …
[HTML][HTML] A suite of de novo c-type cytochromes for functional oxidoreductase engineering
Central to the design of an efficient de novo enzyme is a robust yet mutable protein scaffold.
The maquette approach to protein design offers precisely this, employing simple four-α-helix …
The maquette approach to protein design offers precisely this, employing simple four-α-helix …