User profiles for David Bryant

David Bryant

- Verified email at otago.ac.nz - Cited by 24542

David Bryant

- Verified email at glasgow.ac.uk - Cited by 5223

David N Bryant

- Verified email at aber.ac.uk - Cited by 3057

Application of phylogenetic networks in evolutionary studies

DH Huson, D Bryant - Molecular biology and evolution, 2006 - academic.oup.com
The evolutionary history of a set of taxa is usually represented by a phylogenetic tree, and
this model has greatly facilitated the discussion and testing of hypotheses. However, it is well …

DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists

…, BT Sherman, Q Tan, J Kir, D Liu, D Bryant… - Nucleic acids …, 2007 - academic.oup.com
… community by moderating the DAVID Forum. This article summarizes the key DAVID
components and tool suites in the newly released DAVID Bioinformatics Resources, highlighting …

From cells to organs: building polarized tissue

DM Bryant, KE Mostov - Nature reviews Molecular cell biology, 2008 - nature.com
How do animal cells assemble into tissues and organs? A diverse array of tissue structures
and shapes can be formed by organizing groups of cells into different polarized …

[PDF][PDF] POPART: full-feature software for haplotype network construction

JW Leigh, D Bryant - Methods in ecology and evolution, 2015 - researchgate.net
… Leigh* and David Bryant … (Clement, Posada & Crandall 2000), NETWORK (http://www.fluxus-engineering.com),
SPLITSTREE (Huson & Bryant 2006) and PEGAS (Paradis 2010), and these methods have …

Neighbor-net: an agglomerative method for the construction of phylogenetic networks

D Bryant, V Moulton - Molecular biology and evolution, 2004 - academic.oup.com
We present Neighbor-Net, a distance based method for constructing phylogenetic networks
that is based on the Neighbor-Joining (NJ) algorithm of Saitou and Nei. Neighbor-Net …

A simple and robust statistical test for detecting the presence of recombination

TC Bruen, H Philippe, D Bryant - Genetics, 2006 - academic.oup.com
Recombination is a powerful evolutionary force that merges historically distinct genotypes.
But the extent of recombination within many organisms is unknown, and even determining its …

Linking agricultural practice to insect and bird populations: a historical study over three decades

TG Benton, DM Bryant, L Cole… - Journal of applied …, 2002 - Wiley Online Library
There is continuing debate about the impact of agricultural practices on farmland wildlife. In
particular, it has been postulated that a general decline in insect abundance linked with …

Inferring species trees directly from biallelic genetic markers: bypassing gene trees in a full coalescent analysis

D Bryant, R Bouckaert, J Felsenstein… - Molecular biology …, 2012 - academic.oup.com
The multispecies coalescent provides an elegant theoretical framework for estimating species
trees and species demographics from genetic markers. However, practical applications of …

A molecular network for de novo generation of the apical surface and lumen

DM Bryant, A Datta, AE Rodríguez-Fraticelli… - Nature cell …, 2010 - nature.com
To form epithelial organs cells must polarize and generate de novo an apical domain and
lumen. Epithelial polarization is regulated by polarity complexes that are hypothesized to …

Use of fluid attenuated inversion recovery (FLAIR) pulse sequences in MRI of the brain

JV Hajnal, DJ Bryant, L Kasuboski… - Journal of computer …, 1992 - journals.lww.com
Fluid attenuated inversion recovery pulse sequences with a long echo time (TE) have been
used to image the brain in one volunteer and four patients. The long inversion time used with …