User profiles for David P. Mindell

David P. Mindell

Univ. California, Berkeley
Verified email at berkeley.edu
Cited by 15689

Whole-genome analyses resolve early branches in the tree of life of modern birds

…, P Alström, SV Edwards, A Stamatakis, DP Mindell… - Science, 2014 - science.org
To better determine the history of modern birds, we performed a genome-scale phylogenetic
analysis of 48 species representing all orders of Neoaves using phylogenomic methods …

Approaching a state shift in Earth's biosphere

…, J Kitzes, C Marshall, N Matzke, DP Mindell… - Nature, 2012 - nature.com
Localized ecological systems are known to shift abruptly and irreversibly from one state to
another when they are forced across critical thresholds. Here we review evidence that the …

Comparative genomics reveals insights into avian genome evolution and adaptation

…, GR Graves, P Alström, J Fjeldså, DP Mindell… - Science, 2014 - science.org
Birds are the most species-rich class of tetrapod vertebrates and have wide relevance across
many research fields. We explored bird macroevolution using full genomes from 48 avian …

Primers for a PCR-based approach to mitochondrial genome sequencing in birds and other vertebrates

…, JC Ast, DE Dimcheff, T Yuri, DP Mindell - Molecular phylogenetics …, 1999 - Elsevier
A PCR-based approach to sequencing complete mitochondrial genomes is described along
with a set of 86 primers designed primarily for avian mitochondrial DNA (mtDNA). This PCR-…

Multiple independent origins of mitochondrial gene order in birds

DP Mindell, MD Sorenson… - Proceedings of the …, 1998 - National Acad Sciences
Mitochondrial genomes of all vertebrate animals analyzed to date have the same 37 genes,
whose arrangement in the circular DNA molecule varies only in the relative position of a few …

Phylogeny of eagles, Old World vultures, and other Accipitridae based on nuclear and mitochondrial DNA

HRL Lerner, DP Mindell - Molecular phylogenetics and evolution, 2005 - Elsevier
We assessed phylogenetic relationships for birds of prey in the family Accipitridae using
molecular sequence from two mitochondrial genes (1047 bases ND2 and 1041 bases cyt-b) …

Substitution bias, weighting of DNA sequence evolution, and the phylogenetic position of Fea's viper

A Knight, DP Mindell - Systematic Biology, 1993 - academic.oup.com
The evolution of mitochondrial ribosomal DNA sequences was investigated to infer the
phylogenetic position of the Asian viperAzemiops feaeand to refine weighting methodology for …

Molecular evidence of HIV-1 transmission in a criminal case

ML Metzker, DP Mindell, XM Liu… - Proceedings of the …, 2002 - National Acad Sciences
A gastroenterologist was convicted of attempted second-degree murder by injecting his
former girlfriend with blood or blood-products obtained from an HIV type 1 (HIV-1)-infected …

[HTML][HTML] Strong mitochondrial DNA support for a Cretaceous origin of modern avian lineages

…, JS Rest, J García-Moreno, MD Sorenson, DP Mindell - BMC biology, 2008 - Springer
Background Determining an absolute timescale for avian evolutionary history has proven
contentious. The two sources of information available, paleontological data and inference from …

[PDF][PDF] An extra nucleotide is not translated in mitochondrial ND3 of some birds and turtles.

DP Mindell, MD Sorenson… - Molecular Biology and …, 1998 - researchgate.net
We have discovered a single ‘‘extra’’nucleotide in the mitochondrial (mt) NADH dehydrogenase
subunit III (ND3) gene in 46 species of birds (fig. 1) at position 174 relative to the …