This article describes the implementation of a new docking approach. The method uses a
Tabu search methodology to dock flexibly ligand molecules into rigid receptor structures. It …

Motivation: Structural genomics projects are beginning to produce protein structures with
unknown function, therefore, accurate, automated predictors of protein function are required if …

Bayesian networks (BNs) provide a neat and compact representation for expressing joint
probability distributions (JPDs) and for inference. They are becoming increasingly important in …

Background Biologically distinct subtypes of diffuse large B-cell lymphoma can be identified
using gene-expression analysis to determine their cell of origin, corresponding to germinal …

Metazoan development involves the successive activation and silencing of specific gene
expression programs and is driven by tissue-specific transcription factors programming the …

Purpose Biologic heterogeneity is a feature of diffuse large B-cell lymphoma (DLBCL), and
the existence of a subgroup with poor prognosis and phenotypic proximity to Burkitt …

Computational methods for the detection and characterisation of protein ligand-binding sites
have increasingly become an area of interest now that large amounts of protein structural …

Cell fate decisions during haematopoiesis are governed by lineage‐specific transcription
factors, such as RUNX1, SCL/TAL1, FLI1 and C/EBP family members. To gain insight into how …

Oncogenic transcription factors such as RUNX1/ETO, which is generated by the chromosomal
translocation t(8;21), subvert normal blood cell development by impairing differentiation …

An approach to de novo molecular design, PRO_LIGAND, has been developed that, in the
environment of a large, integrated molecular design and simulation system, provides a …