User profiles for Deniz Saltukoglu
Deniz SaltukogluPostdoctoral researcher Verified email at bioss.uni-freiburg.de Cited by 1841 |
U-Net: deep learning for cell counting, detection, and morphometry
…, O Tietz, C Dal Bosco, S Walsh, D Saltukoglu… - Nature …, 2019 - nature.com
U-Net is a generic deep-learning solution for frequently occurring quantification tasks such
as cell detection and shape measurements in biomedical image data. We present an ImageJ …
as cell detection and shape measurements in biomedical image data. We present an ImageJ …
[PDF][PDF] Regulation of Frizzled-dependent planar polarity signaling by a V-ATPase subunit
Frizzled (Fz) is a seven-pass transmembrane receptor that acts in both Wingless (Wg) and
planar cell polarity (PCP) pathways. A prerequisite for PCP signaling is the asymmetric …
planar cell polarity (PCP) pathways. A prerequisite for PCP signaling is the asymmetric …
Structural principles of B cell antigen receptor assembly
The B cell antigen receptor (BCR) is composed of a membrane-bound class M, D, G, E or A
immunoglobulin for antigen recognition 1 , 2 – 3 and a disulfide-linked Igα (also known as …
immunoglobulin for antigen recognition 1 , 2 – 3 and a disulfide-linked Igα (also known as …
Plasma membrane topography governs the 3D dynamic localization of IgM B cell antigen receptor clusters
D Saltukoglu, B Özdemir, M Holtmannspötter… - The EMBO …, 2023 - embopress.org
B lymphocytes recognize bacterial or viral antigens via different classes of the B cell antigen
receptor (BCR). Protrusive structures termed microvilli cover lymphocyte surfaces, and are …
receptor (BCR). Protrusive structures termed microvilli cover lymphocyte surfaces, and are …
Author Correction: U-Net: deep learning for cell counting, detection, and morphometry
…, O Tietz, CD Bosco, S Walsh, D Saltukoglu… - Nature …, 2019 - nature.com
The version of this paper originally published cited a preprint version of ref. 12 instead of the
published version (Proc. Natl. Acad. Sci. USA 115, 5594–5599; 2018), which was available …
published version (Proc. Natl. Acad. Sci. USA 115, 5594–5599; 2018), which was available …
Spontaneous and electric field–controlled front–rear polarization of human keratinocytes
It has long been known that electrical fields (EFs) are able to influence the direction of migrating
cells, a process commonly referred to as electrotaxis or galvanotaxis. Most studies have …
cells, a process commonly referred to as electrotaxis or galvanotaxis. Most studies have …
Immunoglobulin expression in the endoplasmic reticulum shapes the metabolic fitness of B lymphocytes
…, L Hoenig, X He, D Saltukoglu… - Life Science …, 2020 - life-science-alliance.org
The major function of B lymphocytes is to sense antigens and to produce protective antibodies
after activation. This function requires the expression of a B-cell antigen receptor (BCR), …
after activation. This function requires the expression of a B-cell antigen receptor (BCR), …
Plasma membrane topography governs the three-dimensional dynamic localization of IgM B cell receptor clusters
D Saltukoglu, B Özdemir, M Holtmannspötter, R Reski… - bioRxiv, 2022 - biorxiv.org
B lymphocytes recognize bacterial or viral antigens via different classes of the B cell antigen
receptor (BCR). Protrusive structures termed microvilli cover lymphocyte surfaces and are …
receptor (BCR). Protrusive structures termed microvilli cover lymphocyte surfaces and are …
Engineered chimeric T cell receptor fusion construct (TRuC)-expressing T cells prevent translational shutdown in SARS-CoV-2-infected cells
…, OS Yousefi, S Pathan-Chhatbar, D Saltukoglu… - bioRxiv, 2021 - biorxiv.org
SARS-CoV-2, the causative agent of Covid-19, is known to evade the immune system by
several mechanisms. This includes the shutdown of the host cellular protein synthesis, which …
several mechanisms. This includes the shutdown of the host cellular protein synthesis, which …
A distributed stochastic perception-action loop model of cell motility
In this paper, we present a novel framework for the modeling of cell-migration, and more
specifically the migration of human keratinocytes. The model decouples the embodiment of an …
specifically the migration of human keratinocytes. The model decouples the embodiment of an …