Pushing the boundaries of molecular representation for drug discovery with the graph attention mechanism
Z Xiong, D Wang, X Liu, F Zhong, X Wan… - Journal of medicinal …, 2019 - ACS Publications
Hunting for chemicals with favorable pharmacological, toxicological, and pharmacokinetic
properties remains a formidable challenge for drug discovery. Deep learning provides us with …
properties remains a formidable challenge for drug discovery. Deep learning provides us with …
Machine-learning-guided cocrystal prediction based on large data base
D Wang, Z Yang, B Zhu, X Mei, X Luo - Crystal Growth & Design, 2020 - ACS Publications
A machine-learning model trained on the whole Cambridge Structural Database was developed
to assist high-throughput cocrystal screening. With only 2D structures taken as inputs, …
to assist high-throughput cocrystal screening. With only 2D structures taken as inputs, …
Graph neural network approaches for drug-target interactions
Developing new drugs remains prohibitively expensive, time-consuming, and often involves
safety issues. Accurate prediction of drug-target interactions (DTIs) can guide the drug …
safety issues. Accurate prediction of drug-target interactions (DTIs) can guide the drug …
TransformerCPI: improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label reversal experiments
Motivation Identifying compound–protein interaction (CPI) is a crucial task in drug discovery
and chemogenomics studies, and proteins without three-dimensional structure account for a …
and chemogenomics studies, and proteins without three-dimensional structure account for a …
Active learning for drug design: a case study on the plasma exposure of orally administered drugs
X Ding, R Cui, J Yu, T Liu, T Zhu, D Wang… - Journal of Medicinal …, 2021 - ACS Publications
The success of artificial intelligence (AI) models has been limited by the requirement of large
amounts of high-quality training data, which is just the opposite of the situation in most drug …
amounts of high-quality training data, which is just the opposite of the situation in most drug …
[HTML][HTML] High-performance epoxy vitrimer with superior self-healing, shape-memory, flame retardancy, and antibacterial properties based on multifunctional curing …
The lack of functionalities such as degradability, antibacterial, and flame retardancy is the key
to limit the further wide application of conventional epoxy thermosets. In this work, a novel …
to limit the further wide application of conventional epoxy thermosets. In this work, a novel …
Mechanical stress and the induction of lung fibrosis via the midkine signaling pathway
…, M Ghazarian, W Zeng, PM Spieth, D Wang… - American journal of …, 2015 - atsjournals.org
Rationale: Lung-protective ventilatory strategies have been widely used in patients with acute
respiratory distress syndrome (ARDS), but the ARDS mortality rate remains unacceptably …
respiratory distress syndrome (ARDS), but the ARDS mortality rate remains unacceptably …
The Wnt signaling pathway effector TCF7L2 controls gut and brain proglucagon gene expression and glucose homeostasis
W Shao, D Wang, YT Chiang, W Ip, L Zhu, F Xu… - Diabetes, 2013 - Am Diabetes Assoc
The type 2 diabetes risk gene TCF7L2 is the effector of the Wnt signaling pathway. We
found previously that in gut endocrine L-cell lines, TCF7L2 controls transcription of the …
found previously that in gut endocrine L-cell lines, TCF7L2 controls transcription of the …
Deep learning enhancing kinome-wide polypharmacology profiling: model construction and experiment validation
…, X Liu, X Tan, F Zhong, X Wan, D Wang… - Journal of medicinal …, 2019 - ACS Publications
The kinome-wide virtual profiling of small molecules with high-dimensional structure–activity
data is a challenging task in drug discovery. Here, we present a virtual profiling model …
data is a challenging task in drug discovery. Here, we present a virtual profiling model …
The Bcl-2 family protein inhibitor, ABT-737, has substantial antimyeloma activity and shows synergistic effect with dexamethasone and melphalan
…, SB Liang, Y Trieu, D Reece, J Paterson, D Wang… - Clinical cancer …, 2007 - AACR
Purpose: The aim of this study is to investigate the antimyeloma activity of a novel Bcl-2 family
inhibitor, ABT-737, in preclinical treatment of multiple myeloma. Experimental Design: The …
inhibitor, ABT-737, in preclinical treatment of multiple myeloma. Experimental Design: The …