User profiles for Dirk Eberhard
Dirk EberhardThoraxklinik-Heidelberg gGmbH Verified email at med.uni-heidelberg.de Cited by 7898 |
A physical and functional map of the human TNF-α/NF-κB signal transduction pathway
…, G Bergamini, K Croughton, C Cruciat, D Eberhard… - Nature cell …, 2004 - nature.com
Signal transduction pathways are modular composites of functionally interdependent sets of
proteins that act in a coordinated fashion to transform environmental information into a …
proteins that act in a coordinated fashion to transform environmental information into a …
Quantitative chemical proteomics reveals mechanisms of action of clinical ABL kinase inhibitors
We describe a chemical proteomics approach to profile the interaction of small molecules
with hundreds of endogenously expressed protein kinases and purine-binding proteins. This …
with hundreds of endogenously expressed protein kinases and purine-binding proteins. This …
Tracking cancer drugs in living cells by thermal profiling of the proteome
…, H Franken, T Werner, MF Savitski, D Eberhard… - Science, 2014 - science.org
INTRODUCTION Understanding drug mechanism poses the daunting challenge of determining
the affinity of the drug for all potential targets. Drug target engagement can be assessed …
the affinity of the drug for all potential targets. Drug target engagement can be assessed …
A selective jumonji H3K27 demethylase inhibitor modulates the proinflammatory macrophage response
…, C Bountra, A Bridges, H Diallo, D Eberhard… - Nature, 2012 - nature.com
The jumonji (JMJ) family of histone demethylases are Fe 2+ - and α-ketoglutarate-dependent
oxygenases that are essential components of regulatory transcriptional chromatin …
oxygenases that are essential components of regulatory transcriptional chromatin …
Chemoproteomics profiling of HDAC inhibitors reveals selective targeting of HDAC complexes
…, M Delling, B Dümpelfeld, D Eberhard… - Nature …, 2011 - nature.com
The development of selective histone deacetylase (HDAC) inhibitors with anti-cancer and
anti-inflammatory properties remains challenging in large part owing to the difficulty of probing …
anti-inflammatory properties remains challenging in large part owing to the difficulty of probing …
Inhibition of PAD4 activity is sufficient to disrupt mouse and human NET formation
…, C Chung, PD Craggs, RP Davis, D Eberhard… - Nature chemical …, 2015 - nature.com
PAD4 has been strongly implicated in the pathogenesis of autoimmune, cardiovascular and
oncological diseases through clinical genetics and gene disruption in mice. New selective …
oncological diseases through clinical genetics and gene disruption in mice. New selective …
Thermal proteome profiling monitors ligand interactions with cellular membrane proteins
We extended thermal proteome profiling to detect transmembrane protein–small molecule
interactions in cultured human cells. When we assessed the effects of detergents on ATP-…
interactions in cultured human cells. When we assessed the effects of detergents on ATP-…
[HTML][HTML] Robust and sensitive iTRAQ quantification on an LTQ Orbitrap mass spectrometer
M Bantscheff, M Boesche, D Eberhard… - Molecular & Cellular …, 2008 - ASBMB
Isobaric stable isotope tagging reagents such as tandem mass tags or isobaric tags for relative
and absolute quantification enable multiplexed quantification of peptides via reporter ion …
and absolute quantification enable multiplexed quantification of peptides via reporter ion …
[HTML][HTML] Transcriptional repression by Pax5 (BSAP) through interaction with corepressors of the Groucho family
D Eberhard, G Jiménez, B Heavey… - The EMBO journal, 2000 - embopress.org
Pax5 (BSAP) functions as both a transcriptional activator and repressor during midbrain
patterning, B‐cell development and lymphomagenesis. Here we demonstrate that Pax5 exerts …
patterning, B‐cell development and lymphomagenesis. Here we demonstrate that Pax5 exerts …
Biological plasticity rescues target activity in CRISPR knock outs
…, N Zinn, WF Mueller, S Clauder-Münster, D Eberhard… - Nature …, 2019 - nature.com
Gene knock outs (KOs) are efficiently engineered through CRISPR–Cas9-induced frameshift
mutations. While the efficiency of DNA editing is readily verified by DNA sequencing, a …
mutations. While the efficiency of DNA editing is readily verified by DNA sequencing, a …