Conventional NK cells and tissue-resident ILC1s join forces to control liver metastasis
…, L Heeb, NG Nuñez, L Wyss, D Burri… - Proceedings of the …, 2021 - National Acad Sciences
The liver is a major metastatic target organ, and little is known about the role of immunity in
controlling hepatic metastases. Here, we discovered that the concerted and nonredundant …
controlling hepatic metastases. Here, we discovered that the concerted and nonredundant …
[HTML][HTML] Spatial structure governs the mode of tumour evolution
R Noble, D Burri, C Le Sueur, J Lemant… - Nature ecology & …, 2022 - nature.com
Characterizing the mode—the way, manner or pattern—of evolution in tumours is important
for clinical forecasting and optimizing cancer treatment. Sequencing studies have inferred …
for clinical forecasting and optimizing cancer treatment. Sequencing studies have inferred …
[HTML][HTML] Distinct and additive effects of calorie restriction and rapamycin in aging skeletal muscle
Preserving skeletal muscle function is essential to maintain life quality at high age. Calorie
restriction (CR) potently extends health and lifespan, but is largely unachievable in humans, …
restriction (CR) potently extends health and lifespan, but is largely unachievable in humans, …
Extensible benchmarking of methods that identify and quantify polyadenylation sites from RNA-seq data
S Bryce-Smith, D Burri, MR Gazzara, CJ Herrmann… - RNA, 2023 - rnajournal.cshlp.org
The tremendous rate with which data is generated and analysis methods emerge makes it
increasingly difficult to keep track of their domain of applicability, assumptions, limitations, and …
increasingly difficult to keep track of their domain of applicability, assumptions, limitations, and …
Identification of experimentally-supported poly (A) sites in single-cell RNA-seq data with SCINPAS
Y Moon, D Burri, M Zavolan - NAR genomics and bioinformatics, 2023 - academic.oup.com
Alternative polyadenylation is a main driver of transcriptome diversity in mammals, generating
transcript isoforms with different 3’ ends via cleavage and polyadenylation at distinct …
transcript isoforms with different 3’ ends via cleavage and polyadenylation at distinct …
Shortening of 3′ UTRs in most cell types composing tumor tissues implicates alternative polyadenylation in protein metabolism
D Burri, M Zavolan - RNA, 2021 - rnajournal.cshlp.org
During pre-mRNA maturation 3′ end processing can occur at different polyadenylation sites
in the 3′ untranslated region (3′ UTR) to give rise to transcript isoforms that differ in the …
in the 3′ untranslated region (3′ UTR) to give rise to transcript isoforms that differ in the …
ZARP: An automated workflow for processing of RNA-seq data
RNA sequencing (RNA-seq) is a crucial technique for many scientific studies and multiple
models, and software packages have been developed for the processing and analysis of such …
models, and software packages have been developed for the processing and analysis of such …
GDF15 mediates inflammation-associated bone loss through a brain-bone axis
Metabolic mediators play an important role in regulating chronic inflammation in the body.
Here we report an unexpected role for GDF15 (Growth Differentiation Factor 15), a central …
Here we report an unexpected role for GDF15 (Growth Differentiation Factor 15), a central …
GDF15 mediates inflammation-associated bone loss through a brain-bone axis
D Elewaut, R Van der Cruyssen, J Devan, D Burri… - 2024 - researchsquare.com
Metabolic mediators play an important role in regulating inflammation (1). Rheumatoid
arthritis and spondyloarthritis are common inflammatory diseases of the joint, aggravated in …
arthritis and spondyloarthritis are common inflammatory diseases of the joint, aggravated in …
Distinct and additive effects of calorie restriction and rapamycin in aging skeletal muscle
As global life expectancy continues to climb, maintaining skeletal muscle function is increasingly
essential to ensure a good life quality for aging populations. Calorie restriction (CR) is …
essential to ensure a good life quality for aging populations. Calorie restriction (CR) is …