Pooled CRISPR screening with single-cell transcriptome readout
…, J Klughammer, LC Schuster, A Kuchler, D Alpar… - Nature …, 2017 - nature.com
CRISPR-based genetic screens are accelerating biological discovery, but current methods
have inherent limitations. Widely used pooled screens are restricted to simple readouts …
have inherent limitations. Widely used pooled screens are restricted to simple readouts …
Longitudinal molecular trajectories of diffuse glioma in adults
…, KJ Anderson, O Abiola, K Aldape, KD Alfaro, D Alpar… - Nature, 2019 - nature.com
The evolutionary processes that drive universal therapeutic resistance in adult patients with
diffuse glioma remain unclear 1 , 2 . Here we analysed temporally separated DNA-…
diffuse glioma remain unclear 1 , 2 . Here we analysed temporally separated DNA-…
The DNA methylation landscape of glioblastoma disease progression shows extensive heterogeneity in time and space
…, M Augustin, M Mischkulnig, T Ströbel, D Alpar… - Nature medicine, 2018 - nature.com
Glioblastoma is characterized by widespread genetic and transcriptional heterogeneity, yet
little is known about the role of the epigenome in glioblastoma disease progression. Here, …
little is known about the role of the epigenome in glioblastoma disease progression. Here, …
[HTML][HTML] Chromatin mapping and single-cell immune profiling define the temporal dynamics of ibrutinib response in CLL
…, A Nemc, S Tasnády, M Réti, Z Mátrai, D Alpár… - Nature …, 2020 - nature.com
The Bruton tyrosine kinase (BTK) inhibitor ibrutinib provides effective treatment for patients
with chronic lymphocytic leukemia (CLL), despite extensive heterogeneity in this disease. To …
with chronic lymphocytic leukemia (CLL), despite extensive heterogeneity in this disease. To …
State‐of‐the‐art FISHing: Automated analysis of cytogenetic aberrations in interphase nuclei
G Pajor, B Kajtár, L Pajor, D Alpár - Cytometry Part A, 2012 - Wiley Online Library
Interphase fluorescence in situ hybridization (i‐FISH) is a powerful tool for visualizing
various molecular targets in non‐dividing cells. Manual scoring of i‐FISH signals is a labor …
various molecular targets in non‐dividing cells. Manual scoring of i‐FISH signals is a labor …
Dissection of subclonal evolution by temporal mutation profiling in chronic lymphocytic leukemia patients treated with ibrutinib
A Gángó, D Alpár, B Galik, D Marosvári… - … Journal of Cancer, 2020 - Wiley Online Library
The Bruton's tyrosine kinase (BTK) inhibitor ibrutinib is inducing durable responses in chronic
lymphocytic leukemia (CLL) patients with refractory/relapsed disease or with TP53 defect, …
lymphocytic leukemia (CLL) patients with refractory/relapsed disease or with TP53 defect, …
Molecular subtypes and genomic profile of primary central nervous system lymphoma
Primary central nervous system lymphomas (PCNSL) are aggressive non-Hodgkin
lymphomas affecting the central nervous system (CNS). Although immunophenotyping studies …
lymphomas affecting the central nervous system (CNS). Although immunophenotyping studies …
The genomic landscape of teenage and young adult T‐cell acute lymphoblastic leukemia
Background Treatment on risk adapted intensive pediatric protocols has improved outcome
for teenagers and young adults (TYA) with T‐cell acute lymphoblastic leukemia (T‐ALL). …
for teenagers and young adults (TYA) with T‐cell acute lymphoblastic leukemia (T‐ALL). …
[HTML][HTML] Quantitative analysis and monitoring of EZH2 mutations using liquid biopsy in follicular lymphoma
…, N Nagy, L Kiss, L Kotmayer, A Matolcsy, D Alpár… - Genes, 2020 - mdpi.com
Recent advances in molecular technologies enable sensitive and quantitative assessment
of circulating tumor DNA, offering a noninvasive disease monitoring tool for patients with …
of circulating tumor DNA, offering a noninvasive disease monitoring tool for patients with …
Screening and monitoring of the BTKC481S mutation in a real‐world cohort of patients with relapsed/refractory chronic lymphocytic leukaemia during ibrutinib …
…, A Matolcsy, Z Mátrai, D Alpár - British Journal of …, 2021 - Wiley Online Library
The Bruton's tyrosine kinase (BTK) inhibitor ibrutinib has revolutionised the therapeutic
landscape of chronic lymphocytic leukaemia (CLL). Acquired mutations emerging at position …
landscape of chronic lymphocytic leukaemia (CLL). Acquired mutations emerging at position …