User profiles for DongAhn Yoo

DongAhn Yoo

Seoul National University
Verified email at snu.ac.kr
Cited by 397

[HTML][HTML] The variation and evolution of complete human centromeres

…, CR Catacchio, D Porubsky, Y Mao, DA Yoo… - Nature, 2024 - nature.com
Human centromeres have been traditionally very difficult to sequence and assemble owing
to their repetitive nature and large size 1 . As a result, patterns of human centromeric …

The mosaic genome of indigenous African cattle as a unique genetic resource for African pastoralism

K Kim, T Kwon, T Dessie, DA Yoo, OA Mwai, J Jang… - Nature Genetics, 2020 - nature.com
Cattle pastoralism plays a central role in human livelihood in Africa. However, the genetic
history of its success remains unknown. Here, through whole-genome sequence analysis of …

[HTML][HTML] Structurally divergent and recurrently mutated regions of primate genomes

…, PA Audano, A Rozanski, X Yang, S Zhang, DA Yoo… - Cell, 2024 - cell.com
We sequenced and assembled using multiple long-read sequencing technologies the
genomes of chimpanzee, bonobo, gorilla, orangutan, gibbon, macaque, owl monkey, and …

[HTML][HTML] Establishment and evaluation of prediction model for multiple disease classification based on gut microbial data

S Bang, DA Yoo, SJ Kim, S Jhang, S Cho, H Kim - Scientific reports, 2019 - nature.com
Diseases prediction has been performed by machine learning approaches with various
biological data. One of the representative data is the gut microbial community, which interacts …

[HTML][HTML] False gene and chromosome losses in genome assemblies caused by GC content variation and repeats

J Kim, C Lee, BJ Ko, DA Yoo, S Won, AM Phillippy… - Genome biology, 2022 - Springer
Background Many short-read genome assemblies have been found to be incomplete and
contain mis-assemblies. The Vertebrate Genomes Project has been producing new reference …

ELOA3: A primate-specific RNA polymerase II elongation factor encoded by a tandem repeat gene cluster

…, S Mohammad Parast, M Iwanaszko, Y Aoi, DA Yoo… - Science …, 2023 - science.org
The biological role of the repetitive DNA sequences in the human genome remains an
outstanding question. Recent long-read human genome assemblies have allowed us to identify a …

False gene and chromosome losses affected by assembly and sequence errors

J Kim, C Lee, BJ Ko, DA Yoo, S Won, A Phillippy… - BioRxiv, 2021 - biorxiv.org
Many genome assemblies have been found to be incomplete and contain misassemblies.
The Vertebrate Genomes Project (VGP) has been producing assemblies with an emphasis on …

[HTML][HTML] Identification of potential biomarkers for diagnosis of pancreatic and biliary tract cancers by sequencing of serum microRNAs

K Kim, DA Yoo, HS Lee, KJ Lee, SB Park, C Kim… - BMC medical …, 2019 - Springer
Background Pancreatic and biliary tract cancer (PC and BTC, respectively) are difficult to
diagnose because of their clinical characteristics; however, recent studies suggest that serum …

[HTML][HTML] Cattle genome-wide analysis reveals genetic signatures in trypanotolerant N'Dama

SJ Kim, S Ka, JW Ha, J Kim, DA Yoo, K Kim, HK Lee… - BMC genomics, 2017 - Springer
Background Indigenous cattle in Africa have adapted to various local environments to
acquire superior phenotypes that enhance their survival under harsh conditions. While many …

[HTML][HTML] Widespread false gene gains caused by duplication errors in genome assemblies

BJ Ko, C Lee, J Kim, A Rhie, DA Yoo, K Howe, J Wood… - Genome Biology, 2022 - Springer
Background False duplications in genome assemblies lead to false biological conclusions.
We quantified false duplications in popularly used previous genome assemblies for platypus, …