Mutational heterogeneity in cancer and the search for new cancer-associated genes

…, E Shefler, ML Cortés, D Auclair, G Saksena, D Voet… - Nature, 2013 - nature.com
Major international projects are underway that are aimed at creating a comprehensive catalogue
of all the genes responsible for the initiation and progression of cancer 1 , 2 , 3 , 4 , 5 , 6 …

[PDF][PDF] An integrated TCGA pan-cancer clinical data resource to drive high-quality survival outcome analytics

…, P Lin, S Meier, MS Noble, G Saksena, D Voet… - Cell, 2018 - cell.com
For a decade, The Cancer Genome Atlas (TCGA) program collected clinicopathologic
annotation data along with multi-platform molecular profiles of more than 11,000 human tumors …

[HTML][HTML] A landscape of driver mutations in melanoma

…, MS Lawrence, K Cibulskis, A Sivachenko, D Voet… - Cell, 2012 - cell.com
Despite recent insights into melanoma genetics, systematic surveys for driver mutations are
challenged by an abundance of passenger mutations caused by carcinogenic UV light …

The mutational landscape of head and neck squamous cell carcinoma

…, E Shefler, AH Ramos, P Stojanov, SL Carter, D Voet… - science, 2011 - science.org
Head and neck squamous cell carcinoma (HNSCC) is a common, morbid, and frequently
lethal malignancy. To uncover its mutational spectrum, we analyzed whole-exome sequencing …

Exome sequencing identifies recurrent SPOP, FOXA1 and MED12 mutations in prostate cancer

…, A Sivachenko, SL Carter, G Saksena, D Voet… - Nature …, 2012 - nature.com
Prostate cancer is the second most common cancer in men worldwide and causes over
250,000 deaths each year 1 . Overtreatment of indolent disease also results in significant …

[PDF][PDF] Comprehensive and integrative genomic characterization of hepatocellular carcinoma

…, H Zhang, D Heiman, J Cho, N Gehlenborg, D Voet… - Cell, 2017 - cell.com
Liver cancer has the second highest worldwide cancer mortality rate and has limited
therapeutic options. We analyzed 363 hepatocellular carcinoma (HCC) cases by whole-exome …

[HTML][HTML] Initial genome sequencing and analysis of multiple myeloma

…, A Sivachenko, AK Stewart, S Trudel, R Vij, D Voet… - Nature, 2011 - nature.com
Multiple myeloma is an incurable malignancy of plasma cells, and its pathogenesis is poorly
understood. Here we report the massively parallel sequencing of 38 tumour genomes and …

[HTML][HTML] The genomic complexity of primary human prostate cancer

…, L Ambrogio, T Fennell, M Parkin, G Saksena, D Voet… - Nature, 2011 - nature.com
Prostate cancer is the second most common cause of male cancer deaths in the United
States. However, the full range of prostate cancer genomic alterations is incompletely …

[HTML][HTML] Punctuated evolution of prostate cancer genomes

…, A Sivachenko, SL Carter, G Saksena, D Voet… - Cell, 2013 - cell.com
The analysis of exonic DNA from prostate cancers has identified recurrently mutated genes,
but the spectrum of genome-wide alterations has not been profiled extensively in this …

[HTML][HTML] Melanoma genome sequencing reveals frequent PREX2 mutations

…, SL Carter, Y Drier, P Stojanov, MA Singer, D Voet… - Nature, 2012 - nature.com
Melanoma is notable for its metastatic propensity, lethality in the advanced setting and
association with ultraviolet exposure early in life 1 . To obtain a comprehensive genomic view of …