L1 drives IFN in senescent cells and promotes age-associated inflammation

…, SW Criscione, A Caligiana, G Brocculi, EM Adney… - Nature, 2019 - nature.com
Retrotransposable elements are deleterious at many levels, and the failure of host
surveillance systems for these elements can thus have negative consequences. However, the …

[HTML][HTML] Distinct classes of complex structural variation uncovered across thousands of cancer genome graphs

…, M Darmofal, J DeRose, R Mortensen, EM Adney… - Cell, 2020 - Elsevier
Cancer genomes often harbor hundreds of somatic DNA rearrangement junctions, many of
which cannot be easily classified into simple (eg, deletion) or complex (eg, chromothripsis) …

[HTML][HTML] Affinity proteomics reveals human host factors implicated in discrete stages of LINE-1 retrotransposition

…, P Mita, KR Molloy, CRL Huang, D Li, EM Adney… - Cell, 2013 - cell.com
LINE-1s are active human DNA parasites that are agents of genome dynamics in evolution
and disease. These streamlined elements require host factors to complete their life cycles, …

Dissection of affinity captured LINE-1 macromolecular complexes

…, I Altukhov, KR Molloy, P Mita, H Jiang, EM Adney… - elife, 2018 - elifesciences.org
10.7554/eLife.30094.001 Long Interspersed Nuclear Element-1 (LINE-1, L1) is a mobile genetic
element active in human genomes. L1-encoded ORF1 and ORF2 proteins bind L1 RNAs…

Comprehensive scanning mutagenesis of human retrotransposon LINE-1 identifies motifs essential for function

EM Adney, MT Ochmann, S Sil, DM Truong, P Mita… - Genetics, 2019 - academic.oup.com
Adney et al. describe the complete and comprehensive codon substitution mutagenesis
of human … We then compared read counts, as previously described (Adney 2018). …

Author Correction: L1 drives IFN in senescent cells and promotes age-associated inflammation

…, SW Criscione, A Caligiana, G Brocculi, EM Adney… - Nature, 2019 - nature.com
In this Article, owing to a conceptual error, some of the data points shown in the graphs
corresponded to the means±1 standard deviation, rather than the actual data points. The figure …

[HTML][HTML] LINE-1 derepression in senescent cells triggers interferon and inflammaging

…, SW Criscione, A Caligiana, G Brocculi, EM Adney… - Nature, 2019 - ncbi.nlm.nih.gov
Retrotransposable elements (RTEs) are deleterious at multiple levels, and failure of host
surveillance systems can thus have negative consequences. However, the contribution of RTE …

Novel patterns of complex structural variation revealed across thousands of cancer genome graphs

…, H Tian, J DeRose, R Mortensen, EM Adney… - BioRxiv, 2019 - biorxiv.org
Cancer genomes often harbor hundreds of somatic DNA rearrangement junctions, many of
which cannot be easily classified into simple (eg deletion, translocation) or complex (eg …

Chemical reactivity of Synechococcus sp. PCC 7002 and Synechocystis sp. PCC 6803 hemoglobins: covalent heme attachment and bishistidine coordination

…, MP Pond, BY Winer, EM Adney… - JBIC Journal of …, 2011 - Springer
In the absence of an exogenous ligand, the hemoglobins from the cyanobacteria Synechocystis
sp. PCC 6803 and Synechococcus sp. PCC 7002 coordinate the heme group with two …

Comprehensive scanning mutagenesis of a human retrotransposon identifies motifs essential for function

EM Adney - 2018 - jscholarship.library.jhu.edu
Long Interspersed Nuclear Element-1 (LINE-1, L1) is the only autonomous active transposable
element in the human genome. In general, we strive for molecular level understanding of …