Convergent transcriptional specializations in the brains of humans and song-learning birds

…, MA Moseley, JW Thompson, EJ Soderblom… - Science, 2014 - science.org
INTRODUCTION Vocal learning, the ability to imitate sounds, is a trait that has undergone
convergent evolution in several lineages of birds and mammals, including song-learning birds …

Identification and Functional Analysis of in Vivo Phosphorylation Sites of the Arabidopsis BRASSINOSTEROID-INSENSITIVE1 Receptor Kinase

X Wang, MB Goshe, EJ Soderblom, BS Phinney… - The Plant …, 2005 - academic.oup.com
… PileUp was used to align sequences in 12 LRR RLKs (RD-type kinases) from the RD in
subdomain VIb to the invariant E in subdomain VIII. Note the very high conservation of Ser or Thr …

Identification of an elaborate complex mediating postsynaptic inhibition

A Uezu, DJ Kanak, TWA Bradshaw, EJ Soderblom… - Science, 2016 - science.org
Inhibitory synapses dampen neuronal activity through postsynaptic hyperpolarization. The
composition of the inhibitory postsynapse and the mechanistic basis of its regulation, however…

Chemico-genetic discovery of astrocytic control of inhibition in vivo

…, AM Purkey, A Uezu, JL Courtland, EJ Soderblom… - Nature, 2020 - nature.com
… d, e, Three-colour STED images showing biotinylated proteins adjacent to excitatory synaptic
markers PSD95 and VGLUT1 (d), and inhibitory synaptic markers gephyrin and VGAT (e). f…

The protein expression landscape of the Arabidopsis root

…, S Georgiev, EJ Soderblom… - Proceedings of the …, 2012 - National Acad Sciences
… (MS E ) analyses of each sorted whole root or cell type sample. MS E runs of all samples
were performed in a statistically randomized fashion to avoid systematic temporal bias. MS E

A “best-in-class” systemic biomarker predictor of clinically relevant knee osteoarthritis structural and pain progression

K Zhou, YJ Li, EJ Soderblom, A Reed, V Jain, S Sun… - Science …, 2023 - science.org
We aimed to identify markers in blood (serum) to predict clinically relevant knee osteoarthritis
(OA) progression defined as the combination of both joint structure and pain worsening …

Quantitative proteomics of bronchoalveolar lavage fluid in idiopathic pulmonary fibrosis

…, LD Snyder, JW Thompson, EJ Soderblom… - Journal of proteome …, 2015 - ACS Publications
The proteomic analysis of bronchoalveolar lavage fluid (BALF) can give insight into
pulmonary disease pathology and response to therapy. Here, we describe the first gel-free …

[HTML][HTML] Macrophage cells secrete factors including LRP1 that orchestrate the rejuvenation of bone repair in mice

L Vi, GS Baht, EJ Soderblom, H Whetstone… - Nature …, 2018 - nature.com
e and f Treatment with recombinant Lrp1 cluster three by daily injections at the fracture
site for 2 days following generation of a tibia fracture improves fracture repair in old mice. …

Collision-induced dissociative chemical cross-linking reagents and methodology: applications to protein structural characterization using tandem mass spectrometry …

EJ Soderblom, MB Goshe - Analytical chemistry, 2006 - ACS Publications
Chemical cross-linking combined with mass spectrometry is a viable approach to study the
low-resolution structure of protein and protein complexes. However, unambiguous …

Scanning quadrupole data-independent acquisition, part A: qualitative and quantitative characterization

…, CJ Hughes, PR Juvvadi, EJ Soderblom… - Journal of proteome …, 2018 - ACS Publications
… was better than 85% and ranged from 96 to 98% for the technical replicates for untargeted
searching of the data as graphically summarized in the Venn bar graphs in Figure 4E. For the …