User profiles for Ebbe S. Andersen
Ebbe Sloth AndersenAssociate Professor, Aarhus University Verified email at inano.au.dk Cited by 4653 |
Self-assembly of a nanoscale DNA box with a controllable lid
The unique structural motifs and self-recognition properties of DNA can be exploited to generate
self-assembling DNA nanostructures of specific shapes using a ‘bottom-up’ approach 1 …
self-assembling DNA nanostructures of specific shapes using a ‘bottom-up’ approach 1 …
A single-stranded architecture for cotranscriptional folding of RNA nanostructures
Artificial DNA and RNA structures have been used as scaffolds for a variety of nanoscale
devices. In comparison to DNA structures, RNA structures have been limited in size, but they …
devices. In comparison to DNA structures, RNA structures have been limited in size, but they …
DNA origami design of dolphin-shaped structures with flexible tails
The DNA origami method allows the folding of long, single-stranded DNA sequences into
arbitrary two-dimensional structures by a set of designed oligonucleotides. The method has …
arbitrary two-dimensional structures by a set of designed oligonucleotides. The method has …
RNA origami design tools enable cotranscriptional folding of kilobase-sized nanoscaffolds
RNA origami is a framework for the modular design of nanoscaffolds that can be folded from
a single strand of RNA and used to organize molecular components with nanoscale …
a single strand of RNA and used to organize molecular components with nanoscale …
Construction of a 4 zeptoliters switchable 3D DNA box origami
…, AH Okholm, DH Schaffert, ES Andersen… - ACS …, 2012 - ACS Publications
The DNA origami technique is a recently developed self-assembly method that allows
construction of 3D objects at the nanoscale for various applications. In the current study we report …
construction of 3D objects at the nanoscale for various applications. In the current study we report …
[HTML][HTML] Development of a genetically encodable FRET system using fluorescent RNA aptamers
…, G Grossi, KV Gothelf, ES Andersen - Nature …, 2018 - nature.com
Fluorescent RNA aptamers are useful as markers for tracking RNA molecules inside cells
and for creating biosensor devices. Förster resonance energy transfer (FRET) based on …
and for creating biosensor devices. Förster resonance energy transfer (FRET) based on …
Utilizing RNA origami scaffolds in Saccharomyces cerevisiae for dCas9-mediated transcriptional control
…, MTA Nguyen, ES Andersen - Nucleic Acids …, 2022 - academic.oup.com
… Ebbe S Andersen Ebbe S Andersen … (termed sgRNAOs) and attempt to modulate the
expression of genetic targets in S. cerevisiae yeast. The sgRNAOs have the capacity to bind to …
expression of genetic targets in S. cerevisiae yeast. The sgRNAOs have the capacity to bind to …
RNA target highlights in CASP15: Evaluation of predicted models by structure providers
The first RNA category of the Critical Assessment of Techniques for Structure Prediction
competition was only made possible because of the scientists who provided experimental …
competition was only made possible because of the scientists who provided experimental …
Branched kissing loops for the construction of diverse RNA homooligomeric nanostructures
In biological systems, large and complex structures are often assembled from multiple simpler
identical subunits. This strategy—homooligomerization—allows efficient genetic encoding …
identical subunits. This strategy—homooligomerization—allows efficient genetic encoding …
[HTML][HTML] Role of the trans-activation response element in dimerization of HIV-1 RNA
ES Andersen, SA Contera, B Knudsen… - Journal of Biological …, 2004 - ASBMB
The HIV-1 genome consists of two identical RNA strands that are linked together through
non-covalent interactions. A major determinant for efficient dimerization of the two RNA strands …
non-covalent interactions. A major determinant for efficient dimerization of the two RNA strands …