User profiles for Edward J. Banigan

Edward J Banigan

Physics and Institute for Medical Engineering and Science, MIT
Verified email at mit.edu
Cited by 2568

Generalized Lévy walks and the role of chemokines in migration of effector CD8+ T cells

…, EJ Banigan, DA Christian, C Konradt, ED Tait Wojno… - Nature, 2012 - nature.com
Chemokines have a central role in regulating processes essential to the immune function of
T cells 1 , 2 , 3 , such as their migration within lymphoid tissues and targeting of pathogens in …

Chromatin and lamin A determine two different mechanical response regimes of the cell nucleus

AD Stephens, EJ Banigan, SA Adam… - Molecular biology of …, 2017 - Am Soc Cell Biol
The cell nucleus must continually resist and respond to intercellular and intracellular mechanical
forces to transduce mechanical signals and maintain proper genome organization and …

Chromatin histone modifications and rigidity affect nuclear morphology independent of lamins

AD Stephens, PZ Liu, EJ Banigan… - Molecular biology of …, 2018 - Am Soc Cell Biol
Nuclear shape and architecture influence gene localization, mechanotransduction, transcription,
and cell function. Abnormal nuclear morphology and protrusions termed “blebs” are …

Transcription shapes 3D chromatin organization by interacting with loop extrusion

EJ Banigan, W Tang… - Proceedings of the …, 2023 - National Acad Sciences
Cohesin folds mammalian interphase chromosomes by extruding the chromatin fiber into
numerous loops. “Loop extrusion” can be impeded by chromatin-bound factors, such as CTCF, …

Chromatin's physical properties shape the nucleus and its functions

AD Stephens, EJ Banigan, JF Marko - Current opinion in cell biology, 2019 - Elsevier
The cell nucleus encloses, organizes, and protects the genome. Chromatin maintains
nuclear mechanical stability and shape in coordination with lamins and the cytoskeleton. …

HP1α is a chromatin crosslinker that controls nuclear and mitotic chromosome mechanics

…, EJ Banigan, X Wang, K Chiu, C Herman, J Collado… - Elife, 2021 - elifesciences.org
Chromatin, which consists of DNA and associated proteins, contains genetic information and
is a mechanical component of the nucleus. Heterochromatic histone methylation controls …

Live-cell micromanipulation of a genomic locus reveals interphase chromatin mechanics

…, L Kolar-Znika, VF Scolari, S Hoffmann, EJ Banigan… - Science, 2022 - science.org
Our understanding of the physical principles organizing the genome in the nucleus is limited
by the lack of tools to directly exert and measure forces on interphase chromosomes in vivo …

Loop extrusion: theory meets single-molecule experiments

EJ Banigan, LA Mirny - Current opinion in cell biology, 2020 - Elsevier
Chromosomes are organized as chromatin loops that promote segregation, enhancer-promoter
interactions, and other genomic functions. Loops were hypothesized to form by ‘loop …

CTCF and R-loops are boundaries of cohesin-mediated DNA looping

H Zhang, Z Shi, EJ Banigan, Y Kim, H Yu, X Bai… - Molecular cell, 2023 - cell.com
Cohesin and CCCTC-binding factor (CTCF) are key regulatory proteins of three-dimensional
(3D) genome organization. Cohesin extrudes DNA loops that are anchored by CTCF in a …

Chromosome organization by one-sided and two-sided loop extrusion

EJ Banigan, AA van den Berg, HB Brandão, JF Marko… - Elife, 2020 - elifesciences.org
SMC complexes, such as condensin or cohesin, organize chromatin throughout the cell
cycle by a process known as loop extrusion. SMC complexes reel in DNA, extruding and …