m6A mRNA methylation facilitates resolution of naïve pluripotency toward differentiation
…, DA Jaitin, S Viukov, Y Rais, V Krupalnik, E Chomsky… - Science, 2015 - science.org
Naïve and primed pluripotent states retain distinct molecular properties, yet limited knowledge
exists on how their state transitions are regulated. Here, we identify Mettl3, an N 6 -…
exists on how their state transitions are regulated. Here, we identify Mettl3, an N 6 -…
Derivation of novel human ground state naive pluripotent stem cells
…, L Weinberger, AAF Mansour, YS Manor, E Chomsky… - Nature, 2013 - nature.com
Mouse embryonic stem (ES) cells are isolated from the inner cell mass of blastocysts, and can
be preserved in vitro in a naive inner-cell-mass-like configuration by providing exogenous …
be preserved in vitro in a naive inner-cell-mass-like configuration by providing exogenous …
Deterministic direct reprogramming of somatic cells to pluripotency
Somatic cells can be inefficiently and stochastically reprogrammed into induced pluripotent
stem (iPS) cells by exogenous expression of Oct4 (also called Pou5f1), Sox2, Klf4 and Myc (…
stem (iPS) cells by exogenous expression of Oct4 (also called Pou5f1), Sox2, Klf4 and Myc (…
Single-cell transcriptomic analyses provide insights into the developmental origins of neuroblastoma
…, EM Wecht, M Gartlgruber, A Greco, E Chomsky… - Nature …, 2021 - nature.com
Neuroblastoma is a pediatric tumor of the developing sympathetic nervous system. However,
the cellular origin of neuroblastoma has yet to be defined. Here we studied the single-cell …
the cellular origin of neuroblastoma has yet to be defined. Here we studied the single-cell …
[PDF][PDF] Cnidarian cell type diversity and regulation revealed by whole-organism single-cell RNA-Seq
A Sebé-Pedrós, B Saudemont, E Chomsky, F Plessier… - Cell, 2018 - cell.com
The emergence and diversification of cell types is a leading factor in animal evolution. So far,
systematic characterization of the gene regulatory programs associated with cell type …
systematic characterization of the gene regulatory programs associated with cell type …
Early metazoan cell type diversity and the evolution of multicellular gene regulation
A Sebé-Pedrós, E Chomsky, K Pang… - Nature ecology & …, 2018 - nature.com
A hallmark of metazoan evolution is the emergence of genomic mechanisms that implement
cell-type-specific functions. However, the evolution of metazoan cell types and their …
cell-type-specific functions. However, the evolution of metazoan cell types and their …
[HTML][HTML] MetaCell: analysis of single-cell RNA-seq data using K-nn graph partitions
scRNA-seq profiles each represent a highly partial sample of mRNA molecules from a unique
cell that can never be resampled, and robust analysis must separate the sampling effect …
cell that can never be resampled, and robust analysis must separate the sampling effect …
Dynamic and static maintenance of epigenetic memory in pluripotent and somatic cells
…, Z Mukamel, NM Cohen, G Landan, E Chomsky… - Nature, 2014 - nature.com
Stable maintenance of gene regulatory programs is essential for normal function in
multicellular organisms. Epigenetic mechanisms, and DNA methylation in particular, are …
multicellular organisms. Epigenetic mechanisms, and DNA methylation in particular, are …
Transient acquisition of pluripotency during somatic cell transdifferentiation with iPSC reprogramming factors
I Maza, I Caspi, A Zviran, E Chomsky, Y Rais… - Nature …, 2015 - nature.com
Somatic cells can be transdifferentiated to other cell types without passing through a
pluripotent state by ectopic expression of appropriate transcription factors 1 , 2 . Recent reports …
pluripotent state by ectopic expression of appropriate transcription factors 1 , 2 . Recent reports …
[PDF][PDF] A single-embryo, single-cell time-resolved model for mouse gastrulation
…, S Cheng, R Ben-Yair, R Hadas, Y Rais, E Chomsky… - Cell, 2021 - cell.com
Mouse embryonic development is a canonical model system for studying mammalian cell
fate acquisition. Recently, single-cell atlases comprehensively charted embryonic …
fate acquisition. Recently, single-cell atlases comprehensively charted embryonic …