User profiles for Elmir Mahammadov

Elmir Mahammadov

Postdoctoral Fellow, Berlin Institute of Medical Systems Biology
Verified email at mdc-berlin.de
Cited by 377

Single-cell transcriptomic characterization of a gastrulating human embryo

RCV Tyser, E Mahammadov, S Nakanoh, L Vallier… - Nature, 2021 - nature.com
Gastrulation is the fundamental process in all multicellular animals through which the basic
body plan is first laid down 1 , 2 , 3 – 4 . It is pivotal in generating cellular diversity …

[HTML][HTML] DNA replication fork speed underlies cell fate changes and promotes reprogramming

…, J Fiorentino, E Mahammadov… - Nature Genetics, 2022 - nature.com
Totipotency emerges in early embryogenesis, but its molecular underpinnings remain poorly
characterized. In the present study, we employed DNA fiber analysis to investigate how …

A spatially resolved single cell atlas of human gastrulation

RCV Tyser, E Mahammadov, S Nakanoh, L Vallier… - BioRxiv, 2020 - biorxiv.org
Gastrulation is the fundamental process during the embryogenesis of all multicellular
animals through which the basic body plan is first laid down. It is pivotal in generating cellular …

Cell competition acts as a purifying selection to eliminate cells with mitochondrial defects during early mouse development

…, T Zawadzki, B Pernaute, E Mahammadov… - Nature …, 2021 - nature.com
Cell competition is emerging as a quality-control mechanism that eliminates unfit cells in a
wide range of settings from development to the adult. However, the nature of the cells …

[HTML][HTML] Synergies of multiple zeitgebers tune entrainment

S Grabe, E Mahammadov, MD Olmo… - Frontiers in Network …, 2022 - frontiersin.org
Circadian rhythms are biological rhythms with a period close to 24 h. They become entrained
to the Earth’s solar day via different periodic cues, so-called zeitgebers. The entrainment of …

[PDF][PDF] Differences in mitochondrial activity trigger cell competition during early mouse development

…, T Zawadzki, B Pernaute, E Mahammadov… - bioRxiv, 2020 - researchgate.net
Cell competition is emerging as a quality control mechanism that eliminates unfit cells in a
wide range of settings from development to the adult. However, the nature of the cells …

[PDF][PDF] MitoHEAR: an R package for the estimation and downstream statistical analysis of the mitochondrial DNA heteroplasmy calculated from single-cell datasets

G Lubatti, E Mahammadov, A Scialdone - Journal of Open Source …, 2022 - joss.theoj.org
Eukaryotic cells rely on mitochondria: organelles that are equipped with their own DNA (mtDNA)
to produce the energy they need. Each cell includes multiple mtDNA copies that are not …

[HTML][HTML] Myeloid-Biased HSC Require Semaphorin4a from the Bone Marrow Niche for Self-Renewal Under Stress and Life-Long Persistence

D Toghani, S Zeng, E Mahammadov, E Crosse… - Blood, 2021 - Elsevier
A subset of hematopoietic stem cells with inherent myeloid and platelet bias (myHSC) is
positioned at the top of hematopoietic hierarchy and considered the most primitive. Notably, …

[PDF][PDF] Comparison of algorithms used in single-cell transcriptomic data analysis

J Isbarov, E Mahammadov - researchgate.net
Single-cell analysis is an increasingly relevant approach in” omics” studies. In the last
decade, it has been applied to various fields, including cancer biology, neuroscience, and, …

Elucidating cell-fate decision-making of mammalian pluripotent cells through single-cell transcriptomics

E Mahammadov - 2023 - edoc.ub.uni-muenchen.de
Understanding cellular identity, heterogeneity and differentiation in mammals is crucial for
solving many long-standing questions regarding regenerative medicine, developmental …