Durable strategies to deploy plant resistance in agricultural landscapes
F Fabre, E Rousseau, L Mailleret, B Moury - New Phytologist, 2012 - Wiley Online Library
• The deployment of resistant crops often leads to the emergence of resistance‐breaking
pathogens that suppress the yield benefit provided by the resistance. Here, we theoretically …
pathogens that suppress the yield benefit provided by the resistance. Here, we theoretically …
[PDF][PDF] A defective viral genome strategy elicits broad protective immunity against respiratory viruses
RNA viruses generate defective viral genomes (DVGs) that can interfere with replication of
the parental wild-type virus. To examine their therapeutic potential, we created a DVG by …
the parental wild-type virus. To examine their therapeutic potential, we created a DVG by …
Epidemiological and evolutionary management of plant resistance: optimizing the deployment of cultivar mixtures in time and space in agricultural landscapes
F Fabre, E Rousseau, L Mailleret… - Evolutionary …, 2015 - Wiley Online Library
The management of genes conferring resistance to plant–pathogens should make it possible
to control epidemics (epidemiological perspective) and preserve resistance durability (…
to control epidemics (epidemiological perspective) and preserve resistance durability (…
[HTML][HTML] Experimental and mathematical insights on the interactions between poliovirus and a defective interfering genome
During replication, RNA viruses accumulate genome alterations, such as mutations and
deletions. The interactions between individual variants can determine the fitness of the virus …
deletions. The interactions between individual variants can determine the fitness of the virus …
Virus epidemics, plant-controlled population bottlenecks and the durability of plant resistance
E Rousseau, M Bonneault, F Fabre… - … of the Royal …, 2019 - royalsocietypublishing.org
Plant qualitative resistances to viruses are natural exhaustible resources that can be impaired
by the emergence of resistance-breaking (RB) virus variants. Mathematical modelling can …
by the emergence of resistance-breaking (RB) virus variants. Mathematical modelling can …
[HTML][HTML] Gut metagenome profile of the Nunavik Inuit youth is distinct from industrial and non-industrial counterparts
Comparative metagenomics studies have highlighted differences in microbiome community
structure among human populations over diverse lifestyles and environments. With their …
structure among human populations over diverse lifestyles and environments. With their …
[HTML][HTML] Estimating virus effective population size and selection without neutral markers
E Rousseau, B Moury, L Mailleret, R Senoussi… - PLoS …, 2017 - journals.plos.org
By combining high-throughput sequencing (HTS) with experimental evolution, we can observe
the within-host dynamics of pathogen variants of biomedical or ecological interest. We …
the within-host dynamics of pathogen variants of biomedical or ecological interest. We …
Impact of genetic drift, selection and accumulation level on virus adaptation to its host plants
E Rousseau, L Tamisier, F Fabre… - Molecular plant …, 2018 - Wiley Online Library
The efficiency of plant major resistance genes is limited by the emergence and spread of
resistance‐breaking mutants. Modulation of the evolutionary forces acting on pathogen …
resistance‐breaking mutants. Modulation of the evolutionary forces acting on pathogen …
[HTML][HTML] Learning self-supervised molecular representations for drug–drug interaction prediction
R Kpanou, P Dallaire, E Rousseau, J Corbeil - BMC bioinformatics, 2024 - Springer
Drug–drug interactions (DDI) are a critical concern in healthcare due to their potential to cause
adverse effects and compromise patient safety. Supervised machine learning models for …
adverse effects and compromise patient safety. Supervised machine learning models for …
Quantitative trait loci in pepper control the effective population size of two RNA viruses at inoculation
L Tamisier, E Rousseau, S Barraillé… - Journal of General …, 2017 - microbiologyresearch.org
Infection of plants by viruses is a complex process involving several steps: inoculation into
plant cells, replication in inoculated cells and plant colonization. The success of the different …
plant cells, replication in inoculated cells and plant colonization. The success of the different …