User profiles for Emily F. Davis-Marcisak

Emily Davis-Marcisak

Johns Hopkins School of Medicine
Verified email at jhu.edu
Cited by 885

[PDF][PDF] From bench to bedside: Single-cell analysis for cancer immunotherapy

EF Davis-Marcisak, A Deshpande, GL Stein-O'Brien… - Cancer cell, 2021 - cell.com
Single-cell technologies are emerging as powerful tools for cancer research. These technologies
characterize the molecular state of each cell within a tumor, enabling new exploration …

Correlating cystic fibrosis transmembrane conductance regulator function with clinical features to inform precision treatment of cystic fibrosis

…, MJ Pellicore, EF Davis-Marcisak… - American journal of …, 2019 - atsjournals.org
Rationale: The advent of precision treatment for cystic fibrosis using small-molecule therapeutics
has created a need to estimate potential clinical improvements attributable to increases …

Entinostat Decreases Immune Suppression to Promote Antitumor Responses in a HER2+ Breast Tumor Microenvironment

…, BJ Christmas, VH Narumi, EF Davis-Marcisak… - Cancer immunology …, 2022 - AACR
Emily F. Davis-MarcisakF, Gene weights for the genes most associated with each of the
CoGAPS patterns that corresponded with cellular partitions. G, Proportion of cells in each group …

[HTML][HTML] Integrated single-cell and bulk gene expression and ATAC-seq reveals heterogeneity and early changes in pathways associated with resistance to cetuximab …

LT Kagohara, F Zamuner, EF Davis-Marcisak… - British journal of …, 2020 - nature.com
Background Identifying potential resistance mechanisms while tumour cells still respond to
therapy is critical to delay acquired resistance. Methods We generated the first …

[HTML][HTML] Evaluation of both exonic and intronic variants for effects on RNA splicing allows for accurate assessment of the effectiveness of precision therapies

…, TA Evans, MJ Pellicore, EF Davis-Marcisak… - PLoS …, 2020 - journals.plos.org
Elucidating the functional consequence of molecular defects underlying genetic diseases
enables appropriate design of therapeutic options. Treatment of cystic fibrosis (CF) is an …

[HTML][HTML] Transfer learning between preclinical models and human tumors identifies a conserved NK cell activation signature in anti-CTLA-4 responsive tumors

EF Davis-Marcisak, AA Fitzgerald, MD Kessler… - Genome medicine, 2021 - Springer
Background Tumor response to therapy is affected by both the cell types and the cell states
present in the tumor microenvironment. This is true for many cancer treatments, including …

Differential variation analysis enables detection of tumor heterogeneity using single-cell RNA-sequencing data

EF Davis-Marcisak, TD Sherman, P Orugunta… - Cancer research, 2019 - AACR
Emily F. Davis-Marcisak … Administrative, technical, or material support (ie, reporting or
organizing data, constructing databases): EF Davis-Marcisak, EJ Fertig …

[HTML][HTML] Community-wide hackathons to identify central themes in single-cell multi-omics

KA Lê Cao, AJ Abadi, EF Davis-Marcisak, L Hsu… - Genome biology, 2021 - Springer
Biological systems are fundamentally multi-scale, with mostly uncharacterized molecular
pathways, cellular actions, and cellular communities that collectively give rise to their function. …

[PDF][PDF] A novel mechanism of natural killer cell response to anti-CTLA-4 therapy identified by integrative analysis of mouse and human tumors

EF Davis-Marcisak, AA Fitzgerald, MD Kessler… - …, 2020 - pdfs.semanticscholar.org
Immune checkpoint-inhibitory antibodies (ICIs) are wellestablished immunotherapies.
Despite this, the impact of ICI therapy on non-T cell intratumoral immune cells is ill-defined, …

Correction: Integrated single-cell and bulk gene expression and ATAC-seq reveals heterogeneity and early changes in pathways associated with resistance to …

LT Kagohara, F Zamuner, EF Davis-Marcisak… - British journal of …, 2020 - nature.com
The original version of this Article contained an error in Fig. 1 b. The figure and legend
mislabelled SCC1 as blue and SCC25 as orange, where it should have labelled SCC1 as orange …