Pooled CRISPR screens with imaging on microraft arrays reveals stress granule-regulatory factors

EC Wheeler, AQ Vu, JM Einstein, M DiSalvo… - Nature …, 2020 - nature.com
Genetic screens using pooled CRISPR-based approaches are scalable and inexpensive,
but restricted to standard readouts, including survival, proliferation and sortable markers. …

Reintroduction of the archaic variant of NOVA1 in cortical organoids alters neurodevelopment

…, ES Rice, NK Schaefer, IA Chaim, EC Wheeler… - Science, 2021 - science.org
INTRODUCTION Current views of human evolution, as supported by the fossil record,
indicate that many hominin lineage branches arose, but only one survived to the present. …

[PDF][PDF] Host and pathogen response to bacteriophage engineered against Mycobacterium abscessus lung infection

…, J Hendrix, K Callahan, K Walton, B Vestal, E Wheeler… - Cell, 2022 - cell.com
Two mycobacteriophages were administered intravenously to a male with treatment-refractory
Mycobacterium abscessus pulmonary infection and severe cystic fibrosis lung disease. …

Root-induced changes in nutrient cycling in forests depend on exudation rates

H Yin, E Wheeler, RP Phillips - Soil Biology and Biochemistry, 2014 - Elsevier
Emily Wheeler). We thank Meghan Midgley, Zach Brown, Nate Barnett, Tyler Klingenberger
and Daniel O’Conner for field and lab assistance, and Edward Brzostek, Matt Craig, Meghan …

Advances and challenges in the detection of transcriptome‐wide protein–RNA interactions

EC Wheeler, EL Van Nostrand… - Wiley Interdisciplinary …, 2018 - Wiley Online Library
RNA binding proteins ( RBPs ) play key roles in determining cellular behavior by manipulating
the processing of target RNAs . Robust methods are required to detect the numerous …

Patterns of gastrointestinal bacterial exchange between chimpanzees and humans involved in research and tourism in western Uganda

TL Goldberg, TR Gillespie, IB Rwego, E Wheeler… - Biological …, 2007 - Elsevier
Ecological overlap may increase the risks of microbial exchange between humans and wild
non-human primates. Escherichia coli bacteria were collected from chimpanzees and …

Phylogenetic analysis of the fecal microbial community in herbivorous land and marine iguanas of the Galápagos Islands using 16S rRNA-based pyrosequencing

PY Hong, E Wheeler, IKO Cann, RI Mackie - The ISME journal, 2011 - academic.oup.com
Herbivorous reptiles depend on complex gut microbial communities to effectively degrade
dietary polysaccharides. The composition of these fermentative communities may vary based …

[HTML][HTML] Principles of RNA processing from analysis of enhanced CLIP maps for 150 RNA binding proteins

EL Van Nostrand, GA Pratt, BA Yee, EC Wheeler… - Genome biology, 2020 - Springer
Background A critical step in uncovering rules of RNA processing is to study the in vivo
regulatory networks of RNA binding proteins (RBPs). Crosslinking and immunoprecipitation (CLIP…

[HTML][HTML] Ecosystems as infrastructure

JMC Da Silva, E Wheeler - Perspectives in ecology and conservation, 2017 - Elsevier
Infrastructure is usually defined as all elements of interrelated systems that provide goods
and services essential to enabling, sustaining or enhancing societal living conditions. …

Interaction landscape of inherited polymorphisms with somatic events in cancer

…, C DeBoever, EL Van Nostrand, Y Song, E Wheeler… - Cancer discovery, 2017 - AACR
Recent studies have characterized the extensive somatic alterations that arise during cancer.
However, the somatic evolution of a tumor may be significantly affected by inherited …