User profiles for Eric F. Joyce

Eric Joyce

Associate Professor of Genetics, University of Pennsylvania
Verified email at upenn.edu
Cited by 2972

Versatile design and synthesis platform for visualizing genomes with Oligopaint FISH probes

BJ Beliveau, EF Joyce… - Proceedings of the …, 2012 - National Acad Sciences
A host of observations demonstrating the relationship between nuclear architecture and
processes such as gene expression have led to a number of new technologies for interrogating …

[HTML][HTML] Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes

…, EF Joyce, C Kim-Kiselak, F Bantignies… - Nature …, 2015 - nature.com
Fluorescence in situ hybridization (FISH) is a powerful single-cell technique for studying
nuclear structure and organization. Here we report two advances in FISH-based imaging. We …

[PDF][PDF] Large-scale topological changes restrain malignant progression in colorectal cancer

…, MK Selig, CA Lareau, S Iyer, SC Nguyen, EF Joyce… - Cell, 2020 - cell.com
Widespread changes to DNA methylation and chromatin are well documented in cancer,
but the fate of higher-order chromosomal structure remains obscure. Here we integrated …

[HTML][HTML] Identification of genes that promote or antagonize somatic homolog pairing using a high-throughput FISH–based screen

EF Joyce, BR Williams, T Xie, C Wu - PLoS genetics, 2012 - journals.plos.org
The pairing of homologous chromosomes is a fundamental feature of the meiotic cell. In
addition, a number of species exhibit homolog pairing in nonmeiotic, somatic cells as well, with …

BRD4 orchestrates genome folding to promote neural crest differentiation

…, G Vahedi, GH Eom, GA Blobel, EF Joyce… - Nature …, 2021 - nature.com
Higher-order chromatin structure regulates gene expression, and mutations in proteins
mediating genome folding underlie developmental disorders known as cohesinopathies. …

Drosophila ATM and ATR have distinct activities in the regulation of meiotic DNA damage and repair

EF Joyce, M Pedersen, S Tiong, SK White-Brown… - Journal of Cell …, 2011 - rupress.org
Ataxia telangiectasia–mutated (ATM) and ataxia telangiectasia–related (ATR) kinases are
conserved regulators of cellular responses to double strand breaks (DSBs). During meiosis, …

[HTML][HTML] An atlas of lamina-associated chromatin across twelve human cell types reveals an intermediate chromatin subtype

…, PJ Walsh, SC Nguyen, S Whalen, EF Joyce… - Genome biology, 2023 - Springer
Background Association of chromatin with lamin proteins at the nuclear periphery has emerged
as a potential mechanism to coordinate cell type-specific gene expression and maintain …

[HTML][HTML] Multi-feature clustering of CTCF binding creates robustness for loop extrusion blocking and Topologically Associating Domain boundaries

…, S Bloyer, A Leforestier, EF Joyce… - Nature …, 2023 - nature.com
Topologically Associating Domains (TADs) separate vertebrate genomes into insulated
regulatory neighborhoods that focus genome-associated processes. TADs are formed by …

Cohesin promotes stochastic domain intermingling to ensure proper regulation of boundary-proximal genes

…, SC Nguyen, Y Lan, Z Xu, R Yunker, EF Joyce - Nature …, 2020 - nature.com
The human genome can be segmented into topologically associating domains (TADs),
which have been proposed to spatially sequester genes and regulatory elements through …

[PDF][PDF] p53 mediates target gene association with nuclear speckles for amplified RNA expression

…, MR Mendoza, SC Little, A Belmont, EF Joyce… - Molecular cell, 2021 - cell.com
Nuclear speckles are prominent nuclear bodies that contain proteins and RNA involved in
gene expression. Although links between nuclear speckles and gene activation are emerging, …