User profiles for Eric W. Klee

Eric Klee

Mayo Clinic
Verified email at mayo.edu
Cited by 9365

[HTML][HTML] Standards and guidelines for validating next-generation sequencing bioinformatics pipelines: a joint recommendation of the Association for Molecular …

…, C Coldren, A Karunamurthy, NS Kip, EW Klee… - The Journal of Molecular …, 2018 - Elsevier
Bioinformatics pipelines are an integral component of next-generation sequencing (NGS).
Processing raw sequence data to detect genomic alterations has significant impact on …

[HTML][HTML] Integrated genomic characterization reveals novel, therapeutically relevant drug targets in FGFR and EGFR pathways in sporadic intrahepatic …

…, M Block, RR McWilliams, KN Lazaridis, EW Klee… - PLoS …, 2014 - journals.plos.org
Advanced cholangiocarcinoma continues to harbor a difficult prognosis and therapeutic
options have been limited. During the course of a clinical trial of whole genomic sequencing …

Preemptive genotyping for personalized medicine: design of the right drug, right dose, right time—using genomic data to individualize treatment protocol

…, MJ Ferber, JL Black, LM Baudhuin, EW Klee… - Mayo Clinic …, 2014 - Elsevier
Objective To report the design and implementation of the Right Drug, Right Dose, Right
Time—Using Genomic Data to Individualize Treatment protocol that was developed to test the …

Genome-wide detection of tandem DNA repeats that are expanded in autism

…, G Pellecchia, JL Howe, J Whitney, EW Klee… - Nature, 2020 - nature.com
Tandem DNA repeats vary in the size and sequence of each unit (motif). When expanded,
these tandem DNA repeats have been associated with more than 40 monogenic disorders 1 . …

Maple syrup urine disease: mechanisms and management

…, HK Atwal, S Macklin, EW Klee… - The application of …, 2017 - Taylor & Francis
Maple syrup urine disease (MSUD) is an inborn error of metabolism caused by defects in
the branched-chain α-ketoacid dehydrogenase complex, which results in elevations of the …

[HTML][HTML] 3'tag digital gene expression profiling of human brain and universal reference RNA using Illumina Genome Analyzer

YW Asmann, EW Klee, EA Thompson, EA Perez… - BMC genomics, 2009 - Springer
Background Massive parallel sequencing has the potential to replace microarrays as the
method for transcriptome profiling. Currently there are two protocols: full-length RNA …

Adrenomedullin is up-regulated in patients with pancreatic cancer and causes insulin resistance in β cells and mice

…, S Dutta, GG Klee, EW Klee, TC Smyrk, W Bamlet… - Gastroenterology, 2012 - Elsevier
BACKGROUND & AIMS: New-onset diabetes in patients with pancreatic cancer is likely to
be a paraneoplastic phenomenon caused by tumor-secreted products. We aimed to identify …

Bioinformatics for clinical next generation sequencing

GR Oliver, SN Hart, EW Klee - Clinical chemistry, 2015 - academic.oup.com
BACKGROUND Next generation sequencing (NGS)-based assays continue to redefine the
field of genetic testing. Owing to the complexity of the data, bioinformatics has become a …

[HTML][HTML] AMPA receptor GluA2 subunit defects are a cause of neurodevelopmental disorders

…, L Gunderson, L Schultz-Rogers, EW Klee… - Nature …, 2019 - nature.com
AMPA receptors (AMPARs) are tetrameric ligand-gated channels made up of combinations
of GluA1-4 subunits encoded by GRIA1-4 genes. GluA2 has an especially important role …

[HTML][HTML] Preemptive pharmacogenomic testing for precision medicine: a comprehensive analysis of five actionable pharmacogenomic genes using next-generation …

…, LJ Train, LM Baudhuin, EW Klee… - The Journal of Molecular …, 2016 - Elsevier
Significant barriers, such as lack of professional guidelines, specialized training for interpretation
of pharmacogenomics (PGx) data, and insufficient evidence to support clinical utility, …