Gene calling and bacterial genome annotation with BG7

…, M Manrique, E Pareja-Tobes, E Kovach… - … : Methods and Protocols, 2015 - Springer
New massive sequencing technologies are providing many bacterial genome sequences
from diverse taxa but a refined annotation of these genomes is crucial for obtaining scientific …

MG7: Configurable and scalable 16S metagenomics data analysis

A Alekhin, E Kovach, M Manrique, P Pareja-Tobes… - BioRxiv, 2015 - biorxiv.org
As part of the Cambrian explosion of omics data, metagenomics brings to the table a specific,
defining trait: its social essence. The meta prefix exerts its influence, with multitudes …

Nispero: a cloud-computing based Scala tool specially suited for bioinformatics data processing.

E Kovach, A Alekhin, M Manrique, P Pareja-Tobes… - IWBBIO, 2014 - scholar.archive.org
Nowadays it is widely accepted that the bioinformatics data analysis is ar eal bottleneck in
many research activities related to life sciences. Highthroughput t echnologies l ike N ext …

-factorisations of Chevalley groups

NA Vavilov, EI Kovach - Zapiski Nauchnykh Seminarov POMI, 2011 - mathnet.ru
NA Vavilov, EI Kovach, “$\mathrm{SL}_2$-factorisations of Chevalley groups”, Problems in
the theory of representations of algebras and groups. Part 22, Zap. Nauchn. … NA Vavilov …

Statika: managing cloud resources, bioinformatics tools and data.

A Alekhin, E Kovach, P Pareja-Tobes, M Manrique… - IWBBIO, 2014 - scholar.archive.org
Next Generation Sequencing (NGS) has brought a revolution to the bioinformatics l andscape,
de finitely r eshaping f ields s uch asg enomics a nd transcriptomics, by offering sheer …

MG7: A fast horizontally scalable tool based on cloud computing and graph databases for microbial community profiling.

E Kovach, A Alekhin, M Manrique, P Pareja-Tobes… - IWBBIO, 2014 - iwbbio.ugr.es
Methods: MG7 isan ope ns ource t ool i mplemented in J ava a nd Scala, ba sed on c loud c
omputing (Amazon W eb S ervices). The g raph da ta platform B io4j (www. bio4j. com) is us …

Bio4j: bigger, faster, leaner.

P Pareja-Tobes, A Alekhin, E Kovach, M Manrique… - IWBBIO, 2014 - iwbbio.ugr.es
Bio4j (http://bio4j. com) is a high-performance cloud-enabled graphbased bioinformatics
data platform. It is one of the first and most important graph databases for biological data, …

Bio4j: a high-performance cloud-enabled graph-based data platform

P Pareja-Tobes, R Tobes, M Manrique, E Pareja… - BioRxiv, 2015 - biorxiv.org
Background Next Generation Sequencing and other high-throughput technologies have
brought a revolution to the bioinformatics landscape, by offering sheer amounts of data about …

Unitriangular factorisations of Chevalley groups

NA Vavilov, AV Smolensky, B Sury - arXiv preprint arXiv:1107.5414, 2011 - arxiv.org
Lately, the following problem has attracted a lot of attention in various contexts: find the
shortest factorisation $G=UU^-UU^-...U^{\pm}$ of a Chevalley group $G=G(\Phi,R)$ in terms of …

Unitriangular factorizations of Chevalley groups

NA Vavilov, AV Smolensky, B Sury - Journal of Mathematical Sciences, 2012 - Springer
… This is done in the paper by the first author and Evdokim Kovach, currently under way. • A
large number of papers are devoted to the width of Chevalley groups in commutators (see, in …