User profiles for Eve Shinbrot
Eve ShinbrotCancer Genomic Scientist Verified email at bcm.edu Cited by 45299 |
[PDF][PDF] Comprehensive and integrative genomic characterization of hepatocellular carcinoma
Liver cancer has the second highest worldwide cancer mortality rate and has limited
therapeutic options. We analyzed 363 hepatocellular carcinoma (HCC) cases by whole-exome …
therapeutic options. We analyzed 363 hepatocellular carcinoma (HCC) cases by whole-exome …
[PDF][PDF] Genomic and molecular landscape of DNA damage repair deficiency across the cancer genome atlas
DNA damage repair (DDR) pathways modulate cancer risk, progression, and therapeutic
response. We systematically analyzed somatic alterations to provide a comprehensive view of …
response. We systematically analyzed somatic alterations to provide a comprehensive view of …
Trans-ancestry mutational landscape of hepatocellular carcinoma genomes
Diverse epidemiological factors are associated with hepatocellular carcinoma (HCC) prevalence
in different populations. However, the global landscape of the genetic changes in HCC …
in different populations. However, the global landscape of the genetic changes in HCC …
Mutational landscape of aggressive cutaneous squamous cell carcinoma
…, J Yu, DM Muzny, H Doddapaneni, E Shinbrot… - Clinical cancer …, 2014 - AACR
Purpose: Aggressive cutaneous squamous cell carcinoma (cSCC) is often a disfiguring and
lethal disease. Very little is currently known about the mutations that drive aggressive cSCC. …
lethal disease. Very little is currently known about the mutations that drive aggressive cSCC. …
[PDF][PDF] Integrative genomic analysis of cholangiocarcinoma identifies distinct IDH-mutant molecular profiles
Cholangiocarcinoma (CCA) is an aggressive malignancy of the bile ducts, with poor
prognosis and limited treatment options. Here, we describe the integrated analysis of somatic …
prognosis and limited treatment options. Here, we describe the integrated analysis of somatic …
[HTML][HTML] Mutational strand asymmetries in cancer genomes reveal mechanisms of DNA damage and repair
Mutational processes constantly shape the somatic genome, leading to immunity, aging,
cancer, and other diseases. When cancer is the outcome, we are afforded a glimpse into these …
cancer, and other diseases. When cancer is the outcome, we are afforded a glimpse into these …
Genetic mechanisms of immune evasion in colorectal cancer
To understand the genetic drivers of immune recognition and evasion in colorectal cancer,
we analyzed 1,211 colorectal cancer primary tumor samples, including 179 classified as …
we analyzed 1,211 colorectal cancer primary tumor samples, including 179 classified as …
[PDF][PDF] Multilevel genomics-based taxonomy of renal cell carcinoma
…, B Shuch, G Micevic, G De Velasco, E Shinbrot… - Cell reports, 2016 - cell.com
On the basis of multidimensional and comprehensive molecular characterization (including
DNA methalylation and copy number, RNA, and protein expression), we classified 894 renal …
DNA methalylation and copy number, RNA, and protein expression), we classified 894 renal …
Exonuclease mutations in DNA polymerase epsilon reveal replication strand specific mutation patterns and human origins of replication
E Shinbrot, EE Henninger, N Weinhold… - Genome …, 2014 - genome.cshlp.org
Tumors with somatic mutations in the proofreading exonuclease domain of DNA polymerase
epsilon (POLE-exo*) exhibit a novel mutator phenotype, with markedly elevated TCT→TAT …
epsilon (POLE-exo*) exhibit a novel mutator phenotype, with markedly elevated TCT→TAT …
[PDF][PDF] Ampullary cancers harbor ELF3 tumor suppressor gene mutations and exhibit frequent WNT dysregulation
The ampulla of Vater is a complex cellular environment from which adenocarcinomas arise
to form a group of histopathologically heterogenous tumors. To evaluate the molecular …
to form a group of histopathologically heterogenous tumors. To evaluate the molecular …