User profiles for Eve Shinbrot

Eve Shinbrot

Cancer Genomic Scientist
Verified email at bcm.edu
Cited by 45299

[PDF][PDF] Comprehensive and integrative genomic characterization of hepatocellular carcinoma

…, K Mungall, S Sadeghi, L Xi, K Covington, E Shinbrot… - Cell, 2017 - cell.com
Liver cancer has the second highest worldwide cancer mortality rate and has limited
therapeutic options. We analyzed 363 hepatocellular carcinoma (HCC) cases by whole-exome …

[PDF][PDF] Genomic and molecular landscape of DNA damage repair deficiency across the cancer genome atlas

…, Y Shen, M Karimi, H Chen, P Kim, P Jia, E Shinbrot… - Cell reports, 2018 - cell.com
DNA damage repair (DDR) pathways modulate cancer risk, progression, and therapeutic
response. We systematically analyzed somatic alterations to provide a comprehensive view of …

Trans-ancestry mutational landscape of hepatocellular carcinoma genomes

…, BL Slagle, H Nakamura, S Yamamoto, E Shinbrot… - Nature …, 2014 - nature.com
Diverse epidemiological factors are associated with hepatocellular carcinoma (HCC) prevalence
in different populations. However, the global landscape of the genetic changes in HCC …

Mutational landscape of aggressive cutaneous squamous cell carcinoma

…, J Yu, DM Muzny, H Doddapaneni, E Shinbrot… - Clinical cancer …, 2014 - AACR
Purpose: Aggressive cutaneous squamous cell carcinoma (cSCC) is often a disfiguring and
lethal disease. Very little is currently known about the mutations that drive aggressive cSCC. …

[PDF][PDF] Integrative genomic analysis of cholangiocarcinoma identifies distinct IDH-mutant molecular profiles

…, EA Gibb, J Roszik, KR Covington, CC Wu, E Shinbrot… - Cell reports, 2017 - cell.com
Cholangiocarcinoma (CCA) is an aggressive malignancy of the bile ducts, with poor
prognosis and limited treatment options. Here, we describe the integrated analysis of somatic …

[HTML][HTML] Mutational strand asymmetries in cancer genomes reveal mechanisms of DNA damage and repair

…, P Polak, P Stojanov, KR Covington, E Shinbrot… - Cell, 2016 - cell.com
Mutational processes constantly shape the somatic genome, leading to immunity, aging,
cancer, and other diseases. When cancer is the outcome, we are afforded a glimpse into these …

Genetic mechanisms of immune evasion in colorectal cancer

…, BJ Raphael, SJ Salipante, DS Shin, E Shinbrot… - Cancer discovery, 2018 - AACR
To understand the genetic drivers of immune recognition and evasion in colorectal cancer,
we analyzed 1,211 colorectal cancer primary tumor samples, including 179 classified as …

[PDF][PDF] Multilevel genomics-based taxonomy of renal cell carcinoma

…, B Shuch, G Micevic, G De Velasco, E Shinbrot… - Cell reports, 2016 - cell.com
On the basis of multidimensional and comprehensive molecular characterization (including
DNA methalylation and copy number, RNA, and protein expression), we classified 894 renal …

Exonuclease mutations in DNA polymerase epsilon reveal replication strand specific mutation patterns and human origins of replication

E Shinbrot, EE Henninger, N Weinhold… - Genome …, 2014 - genome.cshlp.org
Tumors with somatic mutations in the proofreading exonuclease domain of DNA polymerase
epsilon (POLE-exo*) exhibit a novel mutator phenotype, with markedly elevated TCT→TAT …

[PDF][PDF] Ampullary cancers harbor ELF3 tumor suppressor gene mutations and exhibit frequent WNT dysregulation

…, MM Ittmann, CJ Creighton, AL Johns, E Shinbrot… - Cell reports, 2016 - cell.com
The ampulla of Vater is a complex cellular environment from which adenocarcinomas arise
to form a group of histopathologically heterogenous tumors. To evaluate the molecular …