How ecology and landscape dynamics shape phylogenetic trees
F Gascuel, R Ferrière, R Aguilée… - Systematic biology, 2015 - academic.oup.com
Whether biotic or abiotic factors are the dominant drivers of clade diversification is a long-standing
question in evolutionary biology. The ubiquitous patterns of phylogenetic imbalance …
question in evolutionary biology. The ubiquitous patterns of phylogenetic imbalance …
[HTML][HTML] Clade diversification dynamics and the biotic and abiotic controls of speciation and extinction rates
How ecological interactions, genetic processes, and environmental variability jointly shape
the evolution of species diversity remains a challenging problem in biology. We developed …
the evolution of species diversity remains a challenging problem in biology. We developed …
[HTML][HTML] Host resistance, population structure and the long-term persistence of bubonic plague: contributions of a modelling approach in the Malagasy focus
F Gascuel, M Choisy, JM Duplantier… - PLoS computational …, 2013 - journals.plos.org
Although bubonic plague is an endemic zoonosis in many countries around the world, the
factors responsible for the persistence of this highly virulent disease remain poorly known. …
factors responsible for the persistence of this highly virulent disease remain poorly known. …
The effects of archipelago spatial structure on island diversity and endemism: predictions from a spatially-structured neutral model
F Gascuel, F Laroche, AS Bonnet-Lebrun… - …, 2016 - academic.oup.com
Islands are particularly suited to testing hypotheses about the ecological and evolutionary
mechanisms underpinning community assembly. Yet the complex spatial arrangements of real …
mechanisms underpinning community assembly. Yet the complex spatial arrangements of real …
Ranked tree shapes, nonrandom extinctions, and the loss of phylogenetic diversity
Phylogenetic diversity (PD) is a measure of the evolutionary legacy of a group of species,
which can be used to define conservation priorities. It has been shown that an important loss of …
which can be used to define conservation priorities. It has been shown that an important loss of …
Data from: Host resistance, population structure and the long-term persistence of bubonic plague: contributions of a modelling approach in the Malagasy focus
Although bubonic plague is an endemic zoonosis in many countries around the world, the
factors responsible for the persistence of this highly virulent disease remain poorly known. …
factors responsible for the persistence of this highly virulent disease remain poorly known. …
FORESTT-FORESTs and global environmental changes: social-ecological systems in Transition
Forest social ecological systems play a determinant role in adaptation to global change and
mitigation processes. However, managers and decision-makers are faced with many …
mitigation processes. However, managers and decision-makers are faced with many …
[HTML][HTML] Microevolutionary processes impact macroevolutionary patterns
Background Macroevolutionary modeling of species diversification plays important roles in
inferring large-scale biodiversity patterns. It allows estimation of speciation and extinction …
inferring large-scale biodiversity patterns. It allows estimation of speciation and extinction …
Bio++: efficient extensible libraries and tools for computational molecular evolution
Efficient algorithms and programs for the analysis of the ever-growing amount of biological
sequence data are strongly needed in the genomics era. The pace at which new data and …
sequence data are strongly needed in the genomics era. The pace at which new data and …
[PDF][PDF] Sorbonne Université
O Maliet - 2018 - theses.hal.science
… This chapter is a work that was initiated during my master thesis with Amaury Lambert and
Fanny Gascuel, and was subsequently developed and finished during this PhD. It is now …
Fanny Gascuel, and was subsequently developed and finished during this PhD. It is now …