[HTML][HTML] Spec2Vec: Improved mass spectral similarity scoring through learning of structural relationships
…, S Verhoeven, JH Spaaks, F Diblen… - PLoS computational …, 2021 - journals.plos.org
Spectral similarity is used as a proxy for structural similarity in many tandem mass
spectrometry (MS/MS) based metabolomics analyses such as library matching and molecular …
spectrometry (MS/MS) based metabolomics analyses such as library matching and molecular …
CT image segmentation of bone for medical additive manufacturing using a convolutional neural network
Background The most tedious and time-consuming task in medical additive manufacturing (AM)
is image segmentation. The aim of the present study was to develop and train a …
is image segmentation. The aim of the present study was to develop and train a …
[HTML][HTML] Earth System model evaluation tool (ESMValTool) v2. 0–technical overview
…, L Bock, B Brötz, L de Mora, F Diblen… - Geoscientific Model …, 2020 - gmd.copernicus.org
This paper describes the second major release of the Earth System Model Evaluation Tool (ESMValTool),
a community diagnostic and performance metrics tool for the evaluation of …
a community diagnostic and performance metrics tool for the evaluation of …
matchms-processing and similarity evaluation of mass spectrometry data
Mass spectrometry data is at the heart of numerable applications in the biomedical and life
sciences. With growing use of high throughput techniques researchers need to analyse larger …
sciences. With growing use of high throughput techniques researchers need to analyse larger …
Data multiplexing in radio interferometric calibration
S Yatawatta, F Diblen, H Spreeuw… - Monthly Notices of the …, 2018 - academic.oup.com
New and upcoming radio interferometers will produce unprecedented amount of data that
demand extremely powerful computers for processing. This is a limiting factor due to the large …
demand extremely powerful computers for processing. This is a limiting factor due to the large …
[HTML][HTML] SPOT: Open Source framework for scientific data repository and interactive visualization
spot is an open source and free visual data analytics tool for multi-dimensional data-sets. Its
web-based interface enables user to do a quick and interactive analysis of complex data. …
web-based interface enables user to do a quick and interactive analysis of complex data. …
A stochastic LBFGS algorithm for radio interferometric calibration
…, L De Clercq, H Spreeuw, F Diblen - 2019 IEEE Data …, 2019 - ieeexplore.ieee.org
We present a stochastic, limited-memory Broyden Fletcher Goldfarb Shanno (LBFGS)
algorithm that is suitable for handling very large amounts of data. A direct application of this …
algorithm that is suitable for handling very large amounts of data. A direct application of this …
Radiation hardness of dsipm sensors in a proton therapy radiation environment
F Diblen, T Buitenhuis, T Solf… - … on Nuclear Science, 2017 - ieeexplore.ieee.org
In vivo verification of dose delivery in proton therapy by means of positron emission
tomography (PET) or prompt gamma imaging is mostly based on fast scintillation detectors. The …
tomography (PET) or prompt gamma imaging is mostly based on fast scintillation detectors. The …
[HTML][HTML] Interactive web-based visualization of multidimensional physical and astronomical data
F Diblen, L Hendriks, B Stienen, S Caron… - Frontiers in big …, 2021 - frontiersin.org
In this article, we propose expanding the use of scientific repositories such as Zenodo and
HEP data, in particular, to better study multiparametric solutions of physical models. The …
HEP data, in particular, to better study multiparametric solutions of physical models. The …
Adaptive ADMM in distributed radio interferometric calibration
S Yatawatta, F Diblen… - 2017 IEEE 7th International …, 2017 - ieeexplore.ieee.org
Distributed radio interferometric calibration based on consensus optimization has been
shown to improve the estimation of systematic errors in radio astronomical observations. The …
shown to improve the estimation of systematic errors in radio astronomical observations. The …