User profiles for Florian Nigsch
Florian NigschDirector Data Science, Novartis Institutes for BioMedical Research Verified email at flo.nigsch.com Cited by 3702 |
[HTML][HTML] Online chemical modeling environment (OCHEM): web platform for data storage, model development and publishing of chemical information
The Online Chemical Modeling Environment is a web-based platform that aims to automate
and simplify the typical steps required for QSAR modeling. The platform consists of two …
and simplify the typical steps required for QSAR modeling. The platform consists of two …
[PDF][PDF] Cell types of the human retina and its organoids at single-cell resolution
Human organoids recapitulating the cell-type diversity and function of their target organ are
valuable for basic and translational research. We developed light-sensitive human retinal …
valuable for basic and translational research. We developed light-sensitive human retinal …
The RSPO–LGR4/5–ZNRF3/RNF43 module controls liver zonation and size
…, L Boulter, D Calabrese, M Pikiolek, F Nigsch… - Nature cell …, 2016 - nature.com
LGR4/5 receptors and their cognate RSPO ligands potentiate Wnt/β-catenin signalling and
promote proliferation and tissue homeostasis in epithelial stem cell compartments. In the liver…
promote proliferation and tissue homeostasis in epithelial stem cell compartments. In the liver…
Melting Point Prediction Employing k-Nearest Neighbor Algorithms and Genetic Parameter Optimization
We have applied the k-nearest neighbor (kNN) modeling technique to the prediction of melting
points. A data set of 4119 diverse organic molecules (data set 1) and an additional set of …
points. A data set of 4119 diverse organic molecules (data set 1) and an additional set of …
Why are some properties more difficult to predict than others? A study of QSPR models of solubility, melting point, and Log P
This paper attempts to elucidate differences in QSPR models of aqueous solubility (Log S),
melting point (T m ), and octanol−water partition coefficient (Log P), three properties of …
melting point (T m ), and octanol−water partition coefficient (Log P), three properties of …
[PDF][PDF] YAP, but not RSPO-LGR4/5, signaling in biliary epithelial cells promotes a ductular reaction in response to liver injury
…, R Cuttat, A Waldt, N Carballido-Perrig, F Nigsch… - Cell stem cell, 2019 - cell.com
Biliary epithelial cells (BECs) form bile ducts in the liver and are facultative liver stem cells
that establish a ductular reaction (DR) to support liver regeneration following injury. Liver …
that establish a ductular reaction (DR) to support liver regeneration following injury. Liver …
[HTML][HTML] High-resolution chemical dissection of a model eukaryote reveals targets, pathways and gene functions
…, B Knapp, P Krastel, N Melin, F Nigsch… - Microbiological …, 2014 - Elsevier
Due to evolutionary conservation of biology, experimental knowledge captured from genetic
studies in eukaryotic model organisms provides insight into human cellular pathways and …
studies in eukaryotic model organisms provides insight into human cellular pathways and …
[HTML][HTML] Single-cell and bulk transcriptomics of the liver reveals potential targets of NASH with fibrosis
Fibrosis is characterized by the excessive production of collagen and other extracellular matrix
(ECM) components and represents a leading cause of morbidity and mortality worldwide. …
(ECM) components and represents a leading cause of morbidity and mortality worldwide. …
Rethinking molecular similarity: comparing compounds on the basis of biological activity
Since the advent of high-throughput screening (HTS), there has been an urgent need for
methods that facilitate the interrogation of large-scale chemical biology data to build a mode of …
methods that facilitate the interrogation of large-scale chemical biology data to build a mode of …
[PDF][PDF] Genome-wide screening in human kidney organoids identifies developmental and disease-related aspects of nephrogenesis
Human organoids allow the study of proliferation, lineage specification, and 3D tissue
development. Here we present a genome-wide CRISPR screen in induced pluripotent stem cell (…
development. Here we present a genome-wide CRISPR screen in induced pluripotent stem cell (…