User profiles for François-Xavier Weill

François-Xavier Weill

Professor, Institut Pasteur, Paris, France
Verified email at pasteur.fr
Cited by 20434

Genomic insights into the emergence and spread of antimicrobial-resistant bacterial pathogens

S Baker, N Thomson, FX Weill, KE Holt - Science, 2018 - science.org
Whole-genome sequencing (WGS) has been vital for revealing the rapid temporal and spatial
evolution of antimicrobial resistance (AMR) in bacterial pathogens. Some antimicrobial-…

The EnteroBase user's guide, with case studies on Salmonella transmissions, Yersinia pestis phylogeny, and Escherichia core genomic diversity

…, R Davies, A Robertson, W Tyne, FX Weill… - Genome …, 2020 - genome.cshlp.org
EnteroBase is an integrated software environment that supports the identification of global
population structures within several bacterial genera that include pathogens. Here, we …

[PDF][PDF] Antigenic formulae of the Salmonella serovars

PAD Grimont, FX Weill - … centre for reference and research on …, 2007 - academia.edu
The first publication of the Kauffmann-White scheme (Salmonella Subcommittee, 1934, J. Hyg.
34: 333-350) listed 44 serovars. When F. Kauffmann retired (1964), the scheme contained …

[HTML][HTML] Revisiting the global epidemiology of cholera in conjunction with the genomics of Vibrio cholerae

T Ramamurthy, A Mutreja, FX Weill, B Das… - Frontiers in public …, 2019 - frontiersin.org
Toxigenic Vibrio cholerae is responsible for 1.4 to 4.3 million cases with about 21,000–143,000
deaths per year. Dominance of O1 and O139 serogroups, classical and El tor biotypes, …

High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi

…, J Parkhill, CJ Mazzoni, P Roumagnac, FX Weill… - Nature …, 2008 - nature.com
Isolates of Salmonella enterica serovar Typhi (Typhi), a human-restricted bacterial
pathogen that causes typhoid, show limited genetic variation. We generated whole-genome …

[HTML][HTML] Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events

…, RA Kingsley, NR Thomson, JA Keane, FX Weill… - Nature …, 2015 - nature.com
The emergence of multidrug-resistant (MDR) typhoid is a major global health threat affecting
many countries where the disease is endemic. Here whole-genome sequence analysis of …

Evolutionary History of Salmonella Typhi

P Roumagnac, FX Weill, C Dolecek, S Baker, S Brisse… - Science, 2006 - science.org
For microbial pathogens, phylogeographic differentiation seems to be relatively common.
However, the neutral population structure of Salmonella enterica serovar Typhi reflects the …

[HTML][HTML] Multilocus Sequence Typing as a Replacement for Serotyping in Salmonella enterica

M Achtman, J Wain, FX Weill, S Nair, Z Zhou… - PLoS …, 2012 - journals.plos.org
Salmonella enterica subspecies enterica is traditionally subdivided into serovars by serological
and nutritional characteristics. We used Multilocus Sequence Typing (MLST) to assign …

[HTML][HTML] Supplement 2003–2007 (No. 47) to the white-Kauffmann-Le minor scheme

…, PI Fields, J Bockemühl, PAD Grimont, FX Weill - Research in …, 2010 - Elsevier
This supplement reports the characterization of 70 new Salmonella serovars recognized
between 2003 and 2007 by the WHO Collaborating Center for Reference and Research on …

[HTML][HTML] Supplement 2008–2010 (no. 48) to the white–Kauffmann–Le minor scheme

…, E De Pinna, S Nair, PI Fields, FX Weill - Research in …, 2014 - Elsevier
This supplement (no. 48) of the White–Kauffmann–Le Minor scheme reports on the
characterization of 63 new Salmonella serovars and 25 new variants of previously described …