Two independent modes of chromatin organization revealed by cohesin removal
Imaging and chromosome conformation capture studies have revealed several layers of
chromosome organization, including segregation into megabase-sized active and inactive …
chromosome organization, including segregation into megabase-sized active and inactive …
Transcription factors: from enhancer binding to developmental control
F Spitz, EEM Furlong - Nature reviews genetics, 2012 - nature.com
Developmental progression is driven by specific spatiotemporal domains of gene
expression, which give rise to stereotypically patterned embryos even in the presence of …
expression, which give rise to stereotypically patterned embryos even in the presence of …
Formation of new chromatin domains determines pathogenicity of genomic duplications
Chromosome conformation capture methods have identified subchromosomal structures of
higher-order chromatin interactions called topologically associated domains (TADs) that are …
higher-order chromatin interactions called topologically associated domains (TADs) that are …
Phenotypic impact of genomic structural variation: insights from and for human disease
J Weischenfeldt, O Symmons, F Spitz… - Nature Reviews …, 2013 - nature.com
Genomic structural variants have long been implicated in phenotypic diversity and human
disease, but dissecting the mechanisms by which they exert their functional impact has proven …
disease, but dissecting the mechanisms by which they exert their functional impact has proven …
Long-range enhancers regulating Myc expression are required for normal facial morphogenesis
…, K Langenfeld, NA Fonseca, JC Marioni, F Spitz - Nature …, 2014 - nature.com
Cleft lip with or without cleft palate (CL/P) is one of the most common congenital malformations
observed in humans, with 1 occurrence in every 500–1,000 births 1 , 2 . A 640-kb …
observed in humans, with 1 occurrence in every 500–1,000 births 1 , 2 . A 640-kb …
KAP1 controls endogenous retroviruses in embryonic stem cells
…, H Layard-Liesching, S Verp, J Marquis, F Spitz… - Nature, 2010 - nature.com
More than forty per cent of the mammalian genome is derived from retroelements, of which
about one-quarter are endogenous retroviruses (ERVs) 1 . Some are still active, notably in …
about one-quarter are endogenous retroviruses (ERVs) 1 . Some are still active, notably in …
[HTML][HTML] A global control region defines a chromosomal regulatory landscape containing the HoxD cluster
F Spitz, F Gonzalez, D Duboule - Cell, 2003 - cell.com
During limb development, coordinated expression of several Hoxd genes is required in
presumptive digits. We searched for the underlying control sequences upstream from the cluster …
presumptive digits. We searched for the underlying control sequences upstream from the cluster …
[PDF][PDF] Cnidarian cell type diversity and regulation revealed by whole-organism single-cell RNA-Seq
…, S Schmutz, S Novault, PRH Steinmetz, F Spitz… - Cell, 2018 - cell.com
The emergence and diversification of cell types is a leading factor in animal evolution. So far,
systematic characterization of the gene regulatory programs associated with cell type …
systematic characterization of the gene regulatory programs associated with cell type …
[PDF][PDF] The Shh topological domain facilitates the action of remote enhancers by reducing the effects of genomic distances
Gene expression often requires interaction between promoters and distant enhancers,
which occur within the context of highly organized topologically associating domains (TADs). …
which occur within the context of highly organized topologically associating domains (TADs). …
[HTML][HTML] A regulatory archipelago controls Hox genes transcription in digits
…, E Joye, L Thevenet, E Splinter, W de Laat, F Spitz… - Cell, 2011 - cell.com
The evolution of digits was an essential step in the success of tetrapods. Among the key
players, Hoxd genes are coordinately regulated in developing digits, where they help organize …
players, Hoxd genes are coordinately regulated in developing digits, where they help organize …