Uncovering hidden genetic variation in photosynthesis of field‐grown maize under ozone pollution
NE Choquette, F Ogut, TM Wertin… - Global Change …, 2019 - Wiley Online Library
Ozone is the most damaging air pollutant to crops, currently reducing Midwest US maize
production by up to 10%, yet there has been very little effort to adapt germplasm for ozone …
production by up to 10%, yet there has been very little effort to adapt germplasm for ozone …
[HTML][HTML] Genome-wide association study of Fusarium ear rot disease in the USA maize inbred line collection
CT Zila, F Ogut, MC Romay, CA Gardner, ES Buckler… - BMC plant biology, 2014 - Springer
Background Resistance to Fusarium ear rot of maize is a quantitative and complex trait.
Marker-trait associations to date have had small additive effects and were inconsistent between …
Marker-trait associations to date have had small additive effects and were inconsistent between …
Genetic analysis of diallel progeny test data using factor analytic linear mixed models
Multienvironmental trials are commonly used in plant breeding programs to select superior
genotypes for specific sites or across multiple sites for breeding and deployment decisions. …
genotypes for specific sites or across multiple sites for breeding and deployment decisions. …
[HTML][HTML] Joint-multiple family linkage analysis predicts within-family variation better than single-family analysis of the maize nested association mapping population
Quantitative trait locus (QTL) mapping has been used to dissect the genetic architecture of
complex traits and predict phenotypes for marker-assisted selection. Many QTL mapping …
complex traits and predict phenotypes for marker-assisted selection. Many QTL mapping …
[HTML][HTML] Genomic selection in loblolly pine-from lab to field
Background Tree breeding is logistically complex and expensive, and breeders have long
sought to use molecular markers to accelerate breeding. A candidate gene approach based …
sought to use molecular markers to accelerate breeding. A candidate gene approach based …
Experimental design for large scale omic studies
Molecular phenotyping has expanded from small sample sizes to larger complex studies and
are now a common element in genetic studies. When large scale studies add a molecular …
are now a common element in genetic studies. When large scale studies add a molecular …
Seedling Evaluation of Atlantic Coastal and Piedmont Sources of Pinus taeda L. and Their Hybrids for Cold Hardiness
JA Zapata-Valenzuela, F Ogut, A Kegley… - Forest …, 2015 - academic.oup.com
Seedlings of 59 loblolly pine (Pinus taeda L.) polycross families representing four populations
(Atlantic Coastal, Piedmont, Coastal × Piedmont, and Piedmont × Coastal) were evaluated …
(Atlantic Coastal, Piedmont, Coastal × Piedmont, and Piedmont × Coastal) were evaluated …
Comparison of one-stage and two-stage genome-wide association studies
Linear mixed models are widely used in humans, animals, and plants to conduct genome-wide
association studies (GWAS). A characteristic of experimental designs for plants is that …
association studies (GWAS). A characteristic of experimental designs for plants is that …
[BOOK][B] Predictions of genetic merit in tree breeding using factor analytic linear mixed models and blended genomic relationship matrices
F Ogut - 2012 - search.proquest.com
Increase in computer power and efficiency in DNA sequencing technologies is providing
new opportunities to plant and animal breeders to fit more complex statistical models for …
new opportunities to plant and animal breeders to fit more complex statistical models for …
Phenomics of stomata and water use efficiency in C4 species
…, N Choquette, M Feldman, F Ogut… - Plant and Animal … - genomicscience.energy.gov
Water use efficiency (WUE), which is physiologically distinct from drought tolerance, is a key
target for improving crop productivity, resilience and sustainability. This is because water …
target for improving crop productivity, resilience and sustainability. This is because water …