[HTML][HTML] Organoid cultures recapitulate esophageal adenocarcinoma heterogeneity providing a model for clonality studies and precision therapeutics
…, E Chen, J Gilbert, A Noorani, G Devonshire… - Nature …, 2018 - nature.com
… Organoid cultures of b, c, d CAM277 and f, g, h CAM338 were continually cultured and …
c, g Number of total mutations and mutated cancer-related genes from individual subclones. …
c, g Number of total mutations and mutated cancer-related genes from individual subclones. …
Molecular phenotyping reveals the identity of Barrett's esophagus and its malignant transition
…, CW Bleaney, KT Mahbubani, G Devonshire… - Science, 2021 - science.org
… Font color denotes tissue types, same as in (G). … (G) Fluorescence imaging of GFP indicating
successful transduction of organoids. Ctr, control. (H) Marker genes highly expressed in BE …
successful transduction of organoids. Ctr, control. (H) Marker genes highly expressed in BE …
The landscape of selection in 551 esophageal adenocarcinomas defines genomic biomarkers for the clinic
Esophageal adenocarcinoma (EAC) is a poor-prognosis cancer type with rapidly rising
incidence. Understanding of the genetic events driving EAC development is limited, and there …
incidence. Understanding of the genetic events driving EAC development is limited, and there …
Single-cell RNA sequencing unifies developmental programs of esophageal and gastric intestinal metaplasia
…, TS Cheung, EL Black, N Masqué-Soler, G Devonshire… - Cancer discovery, 2023 - AACR
… G. Devonshire reports grants from Cancer Research UK during the conduct of the study. M.
di Pietro reports grants from the Medical Research Council during the conduct of the study. …
di Pietro reports grants from the Medical Research Council during the conduct of the study. …
Identification of prognostic phenotypes of esophageal adenocarcinoma in 2 independent cohorts
…, M Eldridge, M Secrier, L Bower, G Devonshire… - Gastroenterology, 2018 - Elsevier
Background & Aims Most patients with esophageal adenocarcinoma (EAC) present with de
novo tumors. Although this could be due to inadequate screening strategies, the precise …
novo tumors. Although this could be due to inadequate screening strategies, the precise …
Identification of subtypes of Barrett's esophagus and esophageal adenocarcinoma based on DNA methylation profiles and integration of transcriptome and genome …
Background & Aims Esophageal adenocarcinomas (EACs) are heterogeneous and often
preceded by Barrett’s esophagus (BE). Many genomic changes have been associated with …
preceded by Barrett’s esophagus (BE). Many genomic changes have been associated with …
[HTML][HTML] Longitudinal tracking of 97 esophageal adenocarcinomas using liquid biopsy sampling
…, A Northrop, H Coles, AM Redmond, G Devonshire… - Annals of …, 2021 - Elsevier
Background The incidence of esophageal adenocarcinoma (EAC) is rapidly rising and has
a 5-year survival rate of <20%. Beyond TNM (tumor–node–metastasis) staging, no reliable …
a 5-year survival rate of <20%. Beyond TNM (tumor–node–metastasis) staging, no reliable …
[HTML][HTML] Multi-omic cross-sectional cohort study of pre-malignant Barrett's esophagus reveals early structural variation and retrotransposon activity
…, M di Pietro, S Abbas, G Devonshire… - Nature …, 2022 - nature.com
Barrett’s esophagus is a pre-malignant lesion that can progress to esophageal adenocarcinoma.
We perform a multi-omic analysis of pre-cancer samples from 146 patients with a range …
We perform a multi-omic analysis of pre-cancer samples from 146 patients with a range …
[HTML][HTML] Rearrangement processes and structural variations show evidence of selection in oesophageal adenocarcinomas
Oesophageal adenocarcinoma (OAC) provides an ideal case study to characterize large-scale
rearrangements. Using whole genome short-read sequencing of 383 cases, for which …
rearrangements. Using whole genome short-read sequencing of 383 cases, for which …
Transcriptomic profiling reveals three molecular phenotypes of adenocarcinoma at the gastroesophageal junction
…, L Bower, MD Eldridge, G Devonshire… - … journal of cancer, 2019 - Wiley Online Library
Cancers occurring at the gastroesophageal junction (GEJ) are classified as predominantly
esophageal or gastric, which is often difficult to decipher. We hypothesized that the …
esophageal or gastric, which is often difficult to decipher. We hypothesized that the …