User profiles for Gábor Csárdi

Gábor Csárdi

RStudio
Verified email at rstudio.com
Cited by 20389

[BOOK][B] Statistical analysis of network data with R

ED Kolaczyk, G Csárdi - 2014 - Springer
Networks and network analysis are arguably one of the largest growth areas of the early
twenty-first century in the quantitative sciences. Despite roots in social network analysis going …

Modular analysis of gene expression data with R

G Csárdi, Z Kutalik, S Bergmann - Bioinformatics, 2010 - academic.oup.com
Large sets of data, such as expression profiles from many samples, require analytic tools to
reduce their complexity. The Iterative Signature Algorithm (ISA) is a biclustering algorithm. It …

The evolution of gene expression levels in mammalian organs

…, M Soumillon, A Necsulea, P Julien, G Csárdi… - Nature, 2011 - nature.com
Abstract Changes in gene expression are thought to underlie many of the phenotypic
differences between species. However, large-scale analyses of gene expression evolution were …

Statistical models for network graphs

…, G Csárdi, ED Kolaczyk, G Csárdi - Statistical analysis of …, 2014 - Springer
The network models discussed in the previous chapter serve a variety of useful purposes.
Yet for the purpose of statistical model building, they come up short. Indeed, as Robins and …

[HTML][HTML] Accounting for experimental noise reveals that mRNA levels, amplified by post-transcriptional processes, largely determine steady-state protein levels in yeast

G Csárdi, A Franks, DS Choi, EM Airoldi… - PLoS …, 2015 - journals.plos.org
Cells respond to their environment by modulating protein levels through mRNA transcription
and post-transcriptional control. Modest observed correlations between global steady-state …

ExPASy: SIB bioinformatics resource portal

…, K Arnold, D Baratin, G Csardi… - Nucleic acids …, 2012 - academic.oup.com
ExPASy ( http://www.expasy.org ) has worldwide reputation as one of the main bioinformatics
resources for proteomics. It has now evolved, becoming an extensible and integrative …

Modeling innovation by a kinetic description of the patent citation system

G Csárdi, KJ Strandburg, L Zalányi, J Tobochnik… - Physica A: Statistical …, 2007 - Elsevier
This paper reports results of a network theory approach to the study of the United States patent
system. We model the patent citation network as a discrete time, discrete space stochastic …

[HTML][HTML] Using transcription modules to identify expression clusters perturbed in Williams-Beuren syndrome

CN Henrichsen, G Csárdi, MT Zabot… - PLoS computational …, 2011 - journals.plos.org
The genetic dissection of the phenotypes associated with Williams-Beuren Syndrome (WBS)
is advancing thanks to the study of individuals carrying typical or atypical structural …

[PDF][PDF] IGraph/M: graph theory and network analysis for Mathematica

S Horvát, J Podkalicki, G Csárdi, T Nepusz… - Journal of Open …, 2023 - joss.theoj.org
IGraph/M 1 is an efficient general purpose graph theory and network analysis package for
Mathematica (Wolfram Research, Inc., 2022). IGraph/M serves as the Wolfram Language …

Aging of myelinating glial cells predominantly affects lipid metabolism and immune response pathways

V Verdier, G Csárdi, AS de Preux‐Charles, JJ Médard… - Glia, 2012 - Wiley Online Library
Both the central and the peripheral nervous systems are prone to multiple age‐dependent
neurological deficits, often attributed to still unknown alterations in the function of myelinating …