User profiles for G. Dürnberger
Gerhard DürnbergerBioinformatician at Vienna Biocenter (IMP, IMBA & GMI) Verified email at imp.ac.at Cited by 3402 |
An orthogonal proteomic-genomic screen identifies AIM2 as a cytoplasmic DNA sensor for the inflammasome
…, C Baumann, S Blüml, E Dixit, G Dürnberger… - Nature …, 2009 - nature.com
… (50 mM Tris-HCl, pH 7.5, 150 mM NaCl, 1% (vol/vol) Nonidet-P40, 5 mM EDTA, 5 mM EGTA
and protease inhibitors), and the lysates were cleared by centrifugation (10 min at 16,000 g …
and protease inhibitors), and the lysates were cleared by centrifugation (10 min at 16,000 g …
Chemical proteomic profiles of the BCR-ABL inhibitors imatinib, nilotinib, and dasatinib reveal novel kinase and nonkinase targets
U Rix, O Hantschel, G Dürnberger… - Blood, The Journal …, 2007 - ashpublications.org
… Search parameters were set to a mass tolerance of 20 ppm for the precursor ions and 0.1
g/mol for the fragment ions. Two missed cleavage sites were allowed. Carbamidomethyl …
g/mol for the fragment ions. Two missed cleavage sites were allowed. Carbamidomethyl …
A cross-kingdom conserved ER-phagy receptor maintains endoplasmic reticulum homeostasis during stress
… ICP-MS analysis of the treated agar (7.3 цg/g Fe and 5.9 цg/g P) indicated a contribution
of 1.25 цM Fe and 1.875 цM P to the solid 1% agar medium. Images were analyzed using …
of 1.25 цM Fe and 1.875 цM P to the solid 1% agar medium. Images were analyzed using …
Robust and easy-to-use one-pot workflow for label-free single-cell proteomics
M Matzinger, E Müller, G Dürnberger… - Analytical …, 2023 - ACS Publications
The analysis of ultralow input samples or even individual cells is essential to answering a
multitude of biomedical questions, but current proteomic workflows are limited in their …
multitude of biomedical questions, but current proteomic workflows are limited in their …
ESCO1 and CTCF enable formation of long chromatin loops by protecting cohesinSTAG1 from WAPL
…, P Van Der Lelij, X Huang, G Dürnberger… - Elife, 2020 - elifesciences.org
… (H) Graph depicting the mean normalized difference in fluorescence intensity between the
bleached and unbleached regions from cells treated as in G. Error bars denote sem, n = 10 …
bleached and unbleached regions from cells treated as in G. Error bars denote sem, n = 10 …
Comparative glycoproteomics of stem cells identifies new players in ricin toxicity
…, D Wenzel, A Gattinger, G Dürnberger… - Nature, 2017 - nature.com
… ions within a given MS/MS spectrum, the G-score was calculated as the reciprocal value
of … /MS spectra with a G-score greater than 0.4 were derived from glycopeptides: After G-scoring, …
of … /MS spectra with a G-score greater than 0.4 were derived from glycopeptides: After G-scoring, …
The biophysical, molecular, and anatomical landscape of pigeon CRY4: A candidate light-based quantal magnetosensor
… This approach includes the g and A tensors as well as the electron-electron interactions
in the fitting process. The dipolar coupling D was calculated on the basis of the point-dipole …
in the fitting process. The dipolar coupling D was calculated on the basis of the point-dipole …
Absolute quantification of cohesin, CTCF and their regulators in human cells
… g for 3 min at 4C. The soluble supernatant was centrifuged for a further 20 min at 20000 g at
4… resuspension in 1 ml lysis buffer and centrifugation at 1000 g for 3 min at 4C. Washing was …
4… resuspension in 1 ml lysis buffer and centrifugation at 1000 g for 3 min at 4C. Washing was …
Ultrasensitive NanoLC-MS of subnanogram protein samples using second generation micropillar array LC technology with orbitrap exploris 480 and FAIMS PRO
K Stejskal, J Op de Beeck, G Dürnberger… - Analytical …, 2021 - ACS Publications
In the light of the ongoing single-cell revolution, scientific disciplines are combining forces to
retrieve as much relevant data as possible from trace amounts of biological material. For …
retrieve as much relevant data as possible from trace amounts of biological material. For …
[HTML][HTML] The Fgf/Erf/NCoR1/2 repressive axis controls trophoblast cell fate
…, H Papuchova, E Roitinger, G Dürnberger… - Nature …, 2023 - nature.com
… g, h Tbl1x interactomes identified by mass spectrometry after 3 h PD (g) and 48 h CM/Fgf
withdrawal and CH treatment (h) in differentiating TSCs expressing Tbl1x-3xFlag and …
withdrawal and CH treatment (h) in differentiating TSCs expressing Tbl1x-3xFlag and …