ABySS 2.0: resource-efficient assembly of large genomes using a Bloom filter

…, J Chu, S Yeo, SA Hammond, G Jahesh… - Genome …, 2017 - genome.cshlp.org
The assembly of DNA sequences de novo is fundamental to genomics research. It is the first
of many steps toward elucidating and characterizing whole genomes. Downstream …

[PDF][PDF] The Content of Heavy Metal in the Labu Riverbed Sediments: An Assessment of the Level of Pollution Applying Sediment Quality Guidelines and …

AS Jahesh, S Abd Rahim, WMR Idris - 2016 - researchgate.net
… About 1 g of sediments was dissolved by various reactions into 50ml. The ratio therefore
is 1:50 and results are multiplied by 50. However the steps in reaching the calculations are …

Genome sequence of a gyrovirus associated with ashy storm-petrel

K Waits, RW Bradley, P Warzybok… - Microbiology …, 2018 - Am Soc Microbiol
… The maximum likelihood phylogenetic trees were inferred using PHYML (17) with the WAG+G
substitution model, determined as the optimal model using ProtTest (18), and the pairwise …

Complete chloroplast genome sequence of a white spruce (Picea glauca, genotype WS77111) from eastern Canada

D Lin, L Coombe, SD Jackman… - Microbiology …, 2019 - Am Soc Microbiol
Here, we present the complete chloroplast genome sequence of white spruce ( Picea glauca
, genotype WS77111), a coniferous tree widespread in the boreal forests of North America. …

Draft genome sequence of Bacillus altitudinis Lc5, a biocontrol and plant growth-promoting endophyte strain isolated from indigenous black rice of Manipur

M Potshangbam, D Sahoo, P Verma… - Genome …, 2018 - Am Soc Microbiol
We report here the 3.6-Mb draft genome of Bacillus altitudinis Lc5, a potential plant growth
promoter and an active antagonistic endophyte of black rice. This genome study will provide …

Draft genome sequence of Streptomyces sp. strain DH-12, a soilborne isolate from the Thar Desert with broad-spectrum antibacterial activity

J Jiao, J Paterson, T Busche, C Rückert… - Genome …, 2018 - Am Soc Microbiol
… The final draft genome assembly resulted in 13 contigs totaling 7,604,612 bp, with 147.3-fold
overall coverage and a G+C content of 72.8%. The closest related type strains based on …

[PDF][PDF] Allelopathic effect of aquatic hull extract of rice (Oryza sativa L.) on growth of Silybum marianum and Echinochloa crus-galli

SM Seyyednejad, H Koochak… - African Journal of …, 2010 - academicjournals.org
(Oryza sativa L.) and then used to show their phytotoxicity potential on germination and
seedling growth of Silybum marianum and Echinochloa crus-galli. The water hull extracts of …

Draft genome sequence of the halophilic strain Citrobacter braakii AN-PRR1, isolated from rhizospheric soil of rice (Oryza sativa L.) from Pakistan

A Nawaz, F Mubeen, ZU Qamar… - Microbiology …, 2021 - Am Soc Microbiol
… The gDNA (20 μg) was sheared using a Covaris g-TUBE device; libraries were constructed
using the SMRTbell template preparation v1.0, Sequel binding v2.0, and MagBead v2 kits, …

Draft Genome Sequences of Five Fungal Strains Isolated from Kefir

S Marcišauskas, Y Kim, S Blasche… - Microbiology …, 2021 - Am Soc Microbiol
We present the annotated draft genome sequences of five fungal strains isolated from kefir
grains. These isolates included three ascomycetous ( Candida californica , Kazachstania …

Genome Sequence of Lysobacter sp. Strain BMK333-48F3, the Producer Strain of Potent Lipopeptide Antibiotics of the Tripropeptin Family

P Arlt, H Hashizume, M Igarashi… - Microbiology Resource …, 2021 - Am Soc Microbiol
Lysobacter sp. strain BMK333-48F3 is known primarily for its production of the antibiotically
active tripropeptins. Here, we report its draft genome sequence, which will give insight into …