User profiles for G. Van Domselaar

Gary Van Domselaar

National Microbiology Laboratory, Public Health Agency of Canada
Verified email at phac-aspc.gc.ca
Cited by 11336

[PDF][PDF] The origins and potential future of SARS-CoV-2 variants of concern in the evolving COVID-19 pandemic

…, C Colijn, J Dushoff, M Li, S Mechai, G Van Domselaar… - Current Biology, 2021 - cell.com
One year into the global COVID-19 pandemic, the focus of attention has shifted to the
emergence and spread of SARS-CoV-2 variants of concern (VOCs). After nearly a year of the …

[HTML][HTML] The gut microbiota in immune-mediated inflammatory diseases

JD Forbes, G Van Domselaar… - Frontiers in microbiology, 2016 - frontiersin.org
The collection of microbes and their genes that exist within and on the human body,
collectively known as the microbiome has emerged as a principal factor in human health and …

Visualizing and comparing circular genomes using the CGView family of tools

…, JR Grant, G Van Domselaar - Briefings in …, 2019 - academic.oup.com
Graphical genome maps are widely used to assess genome features and sequence
characteristics. The CGView (Circular Genome Viewer) software family is a popular collection of …

Proksee: in-depth characterization and visualization of bacterial genomes

…, C Chen, M Graham, G Van Domselaar… - Nucleic acids …, 2023 - academic.oup.com
Proksee ( https://proksee.ca ) provides users with a powerful, easy-to-use, and feature-rich
system for assembling, annotating, analysing, and visualizing bacterial genomes. Proksee …

SuperPose: a simple server for sophisticated structural superposition

R Maiti, GH Van Domselaar, H Zhang… - Nucleic acids …, 2004 - academic.oup.com
The SuperPose web server rapidly and robustly calculates both pairwise and multiple protein
structure superpositions using a modified quaternion eigenvalue approach. SuperPose …

Interactive microbial genome visualization with GView

…, P Stothard, G Van Domselaar - …, 2010 - academic.oup.com
GView is a Java application for viewing and examining prokaryotic genomes in a circular or
linear context. It accepts standard sequence file formats and an optional style specification …

[HTML][HTML] High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreak

MW Gilmour, M Graham, G Van Domselaar, S Tyler… - BMC genomics, 2010 - Springer
Background A large, multi-province outbreak of listeriosis associated with ready-to-eat meat
products contaminated with Listeria monocytogenes serotype 1/2a occurred in Canada in …

BASys: a web server for automated bacterial genome annotation

GH Van Domselaar, P Stothard… - Nucleic acids …, 2005 - academic.oup.com
Van Domselaar , … Van Domselaar … BG4 antibody can recognize telomeric G-quadruplexes
harboring destabilizing base modifications and lesions …

[HTML][HTML] A comparative study of the gut microbiota in immune-mediated inflammatory diseases—does a common dysbiosis exist?

…, T de Kievit, M Alfa, CN Bernstein, G Van Domselaar - Microbiome, 2018 - Springer
Background Immune-mediated inflammatory disease (IMID) represents a substantial health
concern. It is widely recognized that IMID patients are at a higher risk for developing …

CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database

…, FSL Brinkman, G Van Domselaar… - Nucleic acids …, 2023 - academic.oup.com
The Comprehensive Antibiotic Resistance Database (CARD; card.mcmaster.ca) combines
the Antibiotic Resistance Ontology (ARO) with curated AMR gene (ARG) sequences and …