User profiles for Gabriel M. Simon

Gabriel Simon

VP of Discovery at Vividion Therapeutics
Verified email at vividion.com
Cited by 8937

Quantitative reactivity profiling predicts functional cysteines in proteomes

E Weerapana, C Wang, GM Simon, F Richter, S Khare… - Nature, 2010 - nature.com
Cysteine is the most intrinsically nucleophilic amino acid in proteins, where its reactivity is
tuned to perform diverse biochemical functions. The absence of a consensus sequence that …

[PDF][PDF] A comprehensive profile of brain enzymes that hydrolyze the endocannabinoid 2-arachidonoylglycerol

JL Blankman, GM Simon, BF Cravatt - Chemistry & biology, 2007 - cell.com
Endogenous ligands for cannabinoid receptors ("endocannabinoids") include the lipid
transmitters anandamide and 2-arachidonoylglycerol (2-AG). Endocannabinoids modulate a …

The biological impact of mass-spectrometry-based proteomics

BF Cravatt, GM Simon, JR Yates Iii - Nature, 2007 - nature.com
In the past decade, there have been remarkable advances in proteomic technologies. Mass
spectrometry has emerged as the preferred method for in-depth characterization of the …

[HTML][HTML] Endocannabinoid biosynthesis proceeding through glycerophospho-N-acyl ethanolamine and a role for α/β-hydrolase 4 in this pathway

GM Simon, BF Cravatt - Journal of Biological Chemistry, 2006 - ASBMB
N-Acyl ethanolamines (NAEs) are a large class of signaling lipids implicated in diverse
physiological processes, including nociception, cognition, anxiety, appetite, and inflammation. It …

[HTML][HTML] Global mapping of the topography and magnitude of proteolytic events in apoptosis

MM Dix, GM Simon, BF Cravatt - Cell, 2008 - cell.com
Proteolysis is a key regulatory process that promotes the (in)activation, translocation, and/or
degradation of proteins. As such, there is considerable interest in methods to …

Inactivation of N-Acyl Phosphatidylethanolamine Phospholipase D Reveals Multiple Mechanisms for the Biosynthesis of Endocannabinoids

D Leung, A Saghatelian, GM Simon, BF Cravatt - Biochemistry, 2006 - ACS Publications
N-Acyl ethanolamines (NAEs) constitute a large and diverse class of signaling lipids that
includes the endogenous cannabinoid anandamide. Like other lipid transmitters, NAEs are …

[PDF][PDF] Bacteria from diverse habitats colonize and compete in the mouse gut

…, A Reyes, J Cheng, FE Rey, MI Smith, GM Simon… - Cell, 2014 - cell.com
To study how microbes establish themselves in a mammalian gut environment, we colonized
germ-free mice with microbial communities from human, zebrafish, and termite guts, human …

[HTML][HTML] Activity-based proteomics of enzyme superfamilies: serine hydrolases as a case study

GM Simon, BF Cravatt - Journal of Biological Chemistry, 2010 - ASBMB
Genome sequencing projects have uncovered thousands of uncharacterized enzymes in
eukaryotic and prokaryotic organisms. Deciphering the physiological functions of enzymes …

[PDF][PDF] An activity-guided map of electrophile-cysteine interactions in primary human T cells

…, M Yokoyama, DB Konrad, KM Lum, GM Simon… - Cell, 2020 - cell.com
Electrophilic compounds originating from nature or chemical synthesis have profound effects
on immune cells. These compounds are thought to act by cysteine modification to alter the …

Superfamily-wide portrait of serine hydrolase inhibition achieved by library-versus-library screening

DA Bachovchin, T Ji, W Li, GM Simon… - Proceedings of the …, 2010 - National Acad Sciences
Serine hydrolases (SHs) are one of the largest and most diverse enzyme classes in mammals.
They play fundamental roles in virtually all physiological processes and are targeted by …